Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP54P61011 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP54P61011 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SRP54P61011 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.74■□□□□ 0.59
SRP54P61011 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SRP54P61011 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.74■□□□□ 0.59
SRP54P61011 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRP54P61011 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.73■□□□□ 0.59
SRP54P61011 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.73■□□□□ 0.59
SRP54P61011 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.73■□□□□ 0.59
SRP54P61011 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SRP54P61011 AC022616.7-201ENST00000525383 220 ntBASIC18.73■□□□□ 0.59
SRP54P61011 AC087388.1-201ENST00000571370 1112 ntBASIC18.73■□□□□ 0.59
SRP54P61011 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.73■□□□□ 0.59
SRP54P61011 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SRP54P61011 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 AC007952.6-201ENST00000573168 2673 ntBASIC18.73■□□□□ 0.59
SRP54P61011 AC003957.1-201ENST00000625108 2673 ntBASIC18.73■□□□□ 0.59
SRP54P61011 KRT8P45-201ENST00000414328 1447 ntBASIC18.73■□□□□ 0.59
SRP54P61011 TREX1-205ENST00000625293 1783 ntBASIC18.73■□□□□ 0.59
SRP54P61011 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SRP54P61011 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SRP54P61011 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SRP54P61011 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.72■□□□□ 0.59
SRP54P61011 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.72■□□□□ 0.59
SRP54P61011 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.72■□□□□ 0.59
SRP54P61011 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.72■□□□□ 0.59
SRP54P61011 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.72■□□□□ 0.59
SRP54P61011 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP54P61011 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP54P61011 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.72■□□□□ 0.59
SRP54P61011 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP54P61011 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.72■□□□□ 0.59
SRP54P61011 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.72■□□□□ 0.59
SRP54P61011 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.72■□□□□ 0.59
SRP54P61011 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SRP54P61011 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.72■□□□□ 0.59
SRP54P61011 AIRN-201ENST00000601203 4374 ntBASIC18.72■□□□□ 0.59
SRP54P61011 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SRP54P61011 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRP54P61011 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP54P61011 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP54P61011 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP54P61011 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.71■□□□□ 0.59
SRP54P61011 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP54P61011 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 TSPY5P-201ENST00000426936 936 ntBASIC18.71■□□□□ 0.59
SRP54P61011 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.71■□□□□ 0.59
SRP54P61011 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP54P61011 AC011558.1-201ENST00000623459 338 ntBASIC18.71■□□□□ 0.59
SRP54P61011 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRP54P61011 AL031432.5-201ENST00000641059 760 ntBASIC18.71■□□□□ 0.59
SRP54P61011 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRP54P61011 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRP54P61011 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.71■□□□□ 0.59
SRP54P61011 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
SRP54P61011 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.7■□□□□ 0.58
SRP54P61011 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.7■□□□□ 0.58
SRP54P61011 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms