Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC096733.2-201ENST00000609937 1394 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 FP475955.4-201ENST00000623131 1990 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAD23BP54727 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.31■□□□□ 0.84
RAD23BP54727 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RAD23BP54727 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RAD23BP54727 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.31■□□□□ 0.84
RAD23BP54727 UNC93B2-201ENST00000285383 730 ntBASIC20.31■□□□□ 0.84
RAD23BP54727 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.31■□□□□ 0.84
RAD23BP54727 SLC25A1P4-201ENST00000567977 778 ntBASIC20.31■□□□□ 0.84
RAD23BP54727 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.31■□□□□ 0.84
RAD23BP54727 AP000525.1-201ENST00000608286 694 ntBASIC20.31■□□□□ 0.84
RAD23BP54727 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.31■□□□□ 0.84
RAD23BP54727 AC098818.2-201ENST00000564925 2320 ntBASIC20.31■□□□□ 0.84
RAD23BP54727 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAD23BP54727 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD23BP54727 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.31■□□□□ 0.84
RAD23BP54727 AL049812.1-201ENST00000432563 2267 ntBASIC20.3■□□□□ 0.84
RAD23BP54727 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD23BP54727 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.3■□□□□ 0.84
RAD23BP54727 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD23BP54727 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RAD23BP54727 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD23BP54727 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD23BP54727 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD23BP54727 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD23BP54727 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 BX323043.1-201ENST00000641006 1765 ntBASIC20.29■□□□□ 0.84
RAD23BP54727 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RAD23BP54727 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAD23BP54727 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD23BP54727 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.28■□□□□ 0.84
RAD23BP54727 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD23BP54727 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms