Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KRT8P45-201ENST00000414328 1447 ntBASIC18.45■□□□□ 0.54
PDX1P52945 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.45■□□□□ 0.54
PDX1P52945 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDX1P52945 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.44■□□□□ 0.54
PDX1P52945 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PDX1P52945 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
PDX1P52945 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.44■□□□□ 0.54
PDX1P52945 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.44■□□□□ 0.54
PDX1P52945 AL671277.2-201ENST00000458060 996 ntBASIC18.44■□□□□ 0.54
PDX1P52945 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.44■□□□□ 0.54
PDX1P52945 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 AL031432.5-201ENST00000641059 760 ntBASIC18.44■□□□□ 0.54
PDX1P52945 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDX1P52945 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
PDX1P52945 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDX1P52945 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.44■□□□□ 0.54
PDX1P52945 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDX1P52945 IER3-202ENST00000376377 1350 ntBASIC18.43■□□□□ 0.54
PDX1P52945 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.43■□□□□ 0.54
PDX1P52945 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDX1P52945 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDX1P52945 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDX1P52945 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.43■□□□□ 0.54
PDX1P52945 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.43■□□□□ 0.54
PDX1P52945 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.43■□□□□ 0.54
PDX1P52945 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.43■□□□□ 0.54
PDX1P52945 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
PDX1P52945 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.43■□□□□ 0.54
PDX1P52945 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDX1P52945 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PDX1P52945 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDX1P52945 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PDX1P52945 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDX1P52945 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PDX1P52945 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.42■□□□□ 0.54
PDX1P52945 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.42■□□□□ 0.54
PDX1P52945 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
PDX1P52945 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.42■□□□□ 0.54
PDX1P52945 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PDX1P52945 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 AC005332.1-201ENST00000577698 1310 ntBASIC18.42■□□□□ 0.54
PDX1P52945 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.42■□□□□ 0.54
PDX1P52945 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDX1P52945 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDX1P52945 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDX1P52945 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.41■□□□□ 0.54
PDX1P52945 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms