Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF140P52738 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF140P52738 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF140P52738 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 AC093827.2-201ENST00000512654 315 ntBASIC18.92■□□□□ 0.62
ZNF140P52738 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.92■□□□□ 0.62
ZNF140P52738 MIR4497-201ENST00000583208 89 ntBASIC18.92■□□□□ 0.62
ZNF140P52738 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF140P52738 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF140P52738 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF140P52738 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 AC066615.1-201ENST00000640911 628 ntBASIC18.92■□□□□ 0.62
ZNF140P52738 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF140P52738 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF140P52738 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF140P52738 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF140P52738 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF140P52738 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF140P52738 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF140P52738 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF140P52738 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF140P52738 AP005242.2-201ENST00000580065 1175 ntBASIC18.91■□□□□ 0.62
ZNF140P52738 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF140P52738 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF140P52738 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF140P52738 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF140P52738 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF140P52738 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF140P52738 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF140P52738 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.9■□□□□ 0.62
ZNF140P52738 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ZNF140P52738 AL355075.4-201ENST00000554988 638 ntBASIC18.9■□□□□ 0.62
ZNF140P52738 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
ZNF140P52738 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF140P52738 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
ZNF140P52738 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF140P52738 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF140P52738 AC079598.2-202ENST00000546624 1451 ntBASIC18.9■□□□□ 0.62
ZNF140P52738 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF140P52738 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF140P52738 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF140P52738 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF140P52738 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
ZNF140P52738 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.89■□□□□ 0.62
ZNF140P52738 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF140P52738 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms