Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.77■□□□□ 0.92
CDR1P51861 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.77■□□□□ 0.92
CDR1P51861 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.77■□□□□ 0.92
CDR1P51861 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
CDR1P51861 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.77■□□□□ 0.92
CDR1P51861 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.77■□□□□ 0.92
CDR1P51861 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDR1P51861 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CDR1P51861 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDR1P51861 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDR1P51861 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDR1P51861 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CDR1P51861 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDR1P51861 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDR1P51861 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CDR1P51861 KRT18P16-201ENST00000510337 1294 ntBASIC20.76■□□□□ 0.91
CDR1P51861 C1QL1P1-201ENST00000568105 661 ntBASIC20.76■□□□□ 0.91
CDR1P51861 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 AL353708.3-201ENST00000610272 989 ntBASIC20.76■□□□□ 0.91
CDR1P51861 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.76■□□□□ 0.91
CDR1P51861 HTR7P1-202ENST00000624664 4411 ntBASIC20.76■□□□□ 0.91
CDR1P51861 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.76■□□□□ 0.91
CDR1P51861 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDR1P51861 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CDR1P51861 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.75■□□□□ 0.91
CDR1P51861 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.75■□□□□ 0.91
CDR1P51861 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.75■□□□□ 0.91
CDR1P51861 AL353807.1-201ENST00000427475 662 ntBASIC20.75■□□□□ 0.91
CDR1P51861 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDR1P51861 NUDT16P1-203ENST00000513809 620 ntBASIC20.75■□□□□ 0.91
CDR1P51861 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.75■□□□□ 0.91
CDR1P51861 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.75■□□□□ 0.91
CDR1P51861 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
CDR1P51861 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.75■□□□□ 0.91
CDR1P51861 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDR1P51861 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.74■□□□□ 0.91
CDR1P51861 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
CDR1P51861 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.74■□□□□ 0.91
CDR1P51861 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.74■□□□□ 0.91
CDR1P51861 RBM17P1-201ENST00000453646 1190 ntBASIC20.74■□□□□ 0.91
CDR1P51861 KRT18P21-201ENST00000515767 1272 ntBASIC20.74■□□□□ 0.91
CDR1P51861 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.74■□□□□ 0.91
CDR1P51861 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CDR1P51861 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 PKD1P1-201ENST00000458669 6805 ntBASIC20.74■□□□□ 0.91
CDR1P51861 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDR1P51861 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR1P51861 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR1P51861 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR1P51861 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
CDR1P51861 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms