Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21■□□□□ 0.95
CDK7P50613 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK7P50613 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21■□□□□ 0.95
CDK7P50613 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21■□□□□ 0.95
CDK7P50613 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21■□□□□ 0.95
CDK7P50613 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDK7P50613 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21■□□□□ 0.95
CDK7P50613 AC079602.3-201ENST00000623931 403 ntBASIC21■□□□□ 0.95
CDK7P50613 AL162741.1-201ENST00000565563 1558 ntBASIC21■□□□□ 0.95
CDK7P50613 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CDK7P50613 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK7P50613 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK7P50613 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDK7P50613 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21■□□□□ 0.95
CDK7P50613 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.99■□□□□ 0.95
CDK7P50613 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDK7P50613 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDK7P50613 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDK7P50613 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CDK7P50613 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.99■□□□□ 0.95
CDK7P50613 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
CDK7P50613 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 HLA-F-220ENST00000434407 884 ntBASIC20.99■□□□□ 0.95
CDK7P50613 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK7P50613 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDK7P50613 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDK7P50613 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CDK7P50613 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
CDK7P50613 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK7P50613 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK7P50613 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK7P50613 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.98■□□□□ 0.95
CDK7P50613 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK7P50613 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK7P50613 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDK7P50613 AC093525.10-201ENST00000625130 1569 ntBASIC20.97■□□□□ 0.95
CDK7P50613 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDK7P50613 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
CDK7P50613 AL157384.1-201ENST00000445995 2473 ntBASIC20.97■□□□□ 0.95
CDK7P50613 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 AL023284.2-201ENST00000405850 579 ntBASIC20.97■□□□□ 0.95
CDK7P50613 TSPY19P-201ENST00000418461 509 ntBASIC20.97■□□□□ 0.95
CDK7P50613 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 TSPY18P-201ENST00000441642 509 ntBASIC20.97■□□□□ 0.95
CDK7P50613 SEC1P-202ENST00000473944 940 ntBASIC20.97■□□□□ 0.95
CDK7P50613 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK7P50613 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK7P50613 AC104692.2-201ENST00000603054 253 ntBASIC20.97■□□□□ 0.95
CDK7P50613 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK7P50613 AP005212.1-201ENST00000581547 1997 ntBASIC20.97■□□□□ 0.95
CDK7P50613 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK7P50613 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDK7P50613 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK7P50613 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK7P50613 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDK7P50613 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDK7P50613 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK7P50613 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDK7P50613 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.96■□□□□ 0.95
CDK7P50613 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK7P50613 CHCHD2P8-201ENST00000429873 447 ntBASIC20.96■□□□□ 0.95
CDK7P50613 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK7P50613 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK7P50613 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CDK7P50613 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK7P50613 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK7P50613 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK7P50613 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms