Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.06■□□□□ 0.96
CPT1AP50416 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPT1AP50416 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.05■□□□□ 0.96
CPT1AP50416 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.05■□□□□ 0.96
CPT1AP50416 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.05■□□□□ 0.96
CPT1AP50416 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.05■□□□□ 0.96
CPT1AP50416 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.05■□□□□ 0.96
CPT1AP50416 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.05■□□□□ 0.96
CPT1AP50416 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.05■□□□□ 0.96
CPT1AP50416 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.05■□□□□ 0.96
CPT1AP50416 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CPT1AP50416 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPT1AP50416 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
CPT1AP50416 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
CPT1AP50416 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CPT1AP50416 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPT1AP50416 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.04■□□□□ 0.96
CPT1AP50416 PRELID1P1-202ENST00000567272 903 ntBASIC21.04■□□□□ 0.96
CPT1AP50416 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.04■□□□□ 0.96
CPT1AP50416 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.04■□□□□ 0.96
CPT1AP50416 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.04■□□□□ 0.96
CPT1AP50416 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.04■□□□□ 0.96
CPT1AP50416 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CPT1AP50416 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.04■□□□□ 0.96
CPT1AP50416 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPT1AP50416 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CPT1AP50416 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPT1AP50416 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
CPT1AP50416 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 AC016734.2-201ENST00000624325 1377 ntBASIC21.03■□□□□ 0.96
CPT1AP50416 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CPT1AP50416 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.03■□□□□ 0.96
CPT1AP50416 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.03■□□□□ 0.96
CPT1AP50416 MIR3917-201ENST00000580971 93 ntBASIC21.03■□□□□ 0.96
CPT1AP50416 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.03■□□□□ 0.96
CPT1AP50416 AL157888.1-201ENST00000631930 593 ntBASIC21.03■□□□□ 0.96
CPT1AP50416 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPT1AP50416 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CPT1AP50416 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.03■□□□□ 0.96
CPT1AP50416 Z82202.1-201ENST00000623446 1880 ntBASIC21.03■□□□□ 0.96
CPT1AP50416 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 AL162741.1-201ENST00000565563 1558 ntBASIC21.02■□□□□ 0.96
CPT1AP50416 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.02■□□□□ 0.96
CPT1AP50416 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.02■□□□□ 0.96
CPT1AP50416 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
CPT1AP50416 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.02■□□□□ 0.96
CPT1AP50416 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 HLA-F-220ENST00000434407 884 ntBASIC21.02■□□□□ 0.96
CPT1AP50416 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.02■□□□□ 0.96
CPT1AP50416 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.02■□□□□ 0.96
CPT1AP50416 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.02■□□□□ 0.96
CPT1AP50416 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPT1AP50416 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPT1AP50416 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.02■□□□□ 0.95
CPT1AP50416 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.02■□□□□ 0.95
CPT1AP50416 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CPT1AP50416 AC112907.3-201ENST00000577781 2400 ntBASIC21.02■□□□□ 0.95
CPT1AP50416 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPT1AP50416 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPT1AP50416 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPT1AP50416 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.01■□□□□ 0.95
CPT1AP50416 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPT1AP50416 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPT1AP50416 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms