Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.02■□□□□ -0
CDC34P49427 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDC34P49427 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDC34P49427 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.02□□□□□ -0.01
CDC34P49427 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC34P49427 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.01□□□□□ -0.01
CDC34P49427 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 KRT19P1-201ENST00000405746 1186 ntBASIC15.01□□□□□ -0.01
CDC34P49427 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.01□□□□□ -0.01
CDC34P49427 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.01□□□□□ -0.01
CDC34P49427 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDC34P49427 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC34P49427 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDC34P49427 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CDC34P49427 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15□□□□□ -0.01
CDC34P49427 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15□□□□□ -0.01
CDC34P49427 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 AC008406.3-201ENST00000620001 1374 ntBASIC15□□□□□ -0.01
CDC34P49427 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15□□□□□ -0.01
CDC34P49427 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDC34P49427 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 KRT18P68-201ENST00000392293 1000 ntBASIC15□□□□□ -0.01
CDC34P49427 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15□□□□□ -0.01
CDC34P49427 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15□□□□□ -0.01
CDC34P49427 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CDC34P49427 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 AC110285.6-201ENST00000617652 491 ntBASIC15□□□□□ -0.01
CDC34P49427 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDC34P49427 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDC34P49427 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15□□□□□ -0.01
CDC34P49427 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15□□□□□ -0.01
CDC34P49427 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDC34P49427 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15□□□□□ -0.01
CDC34P49427 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC34P49427 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC34P49427 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.99□□□□□ -0.01
CDC34P49427 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms