Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.71■□□□□ 0.27
CX3CR1P49238 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.71■□□□□ 0.27
CX3CR1P49238 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CX3CR1P49238 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 AL160286.2-201ENST00000567150 934 ntBASIC16.71■□□□□ 0.27
CX3CR1P49238 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.71■□□□□ 0.27
CX3CR1P49238 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CR1P49238 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CX3CR1P49238 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.71■□□□□ 0.27
CX3CR1P49238 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CR1P49238 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CX3CR1P49238 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CX3CR1P49238 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.7■□□□□ 0.26
CX3CR1P49238 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CX3CR1P49238 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 ESRRAP1-201ENST00000400596 1257 ntBASIC16.7■□□□□ 0.26
CX3CR1P49238 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
CX3CR1P49238 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.7■□□□□ 0.26
CX3CR1P49238 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.7■□□□□ 0.26
CX3CR1P49238 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 FEM1AP3-201ENST00000403722 1741 ntBASIC16.7■□□□□ 0.26
CX3CR1P49238 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CX3CR1P49238 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.7■□□□□ 0.26
CX3CR1P49238 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CX3CR1P49238 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CX3CR1P49238 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CX3CR1P49238 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.69■□□□□ 0.26
CX3CR1P49238 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.69■□□□□ 0.26
CX3CR1P49238 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.69■□□□□ 0.26
CX3CR1P49238 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.69■□□□□ 0.26
CX3CR1P49238 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.69■□□□□ 0.26
CX3CR1P49238 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
CX3CR1P49238 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CX3CR1P49238 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CX3CR1P49238 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.68■□□□□ 0.26
CX3CR1P49238 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.68■□□□□ 0.26
CX3CR1P49238 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.68■□□□□ 0.26
CX3CR1P49238 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CX3CR1P49238 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 AC005082.1-201ENST00000413042 2259 ntBASIC16.68■□□□□ 0.26
CX3CR1P49238 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CX3CR1P49238 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CX3CR1P49238 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms