Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.76■□□□□ 0.75
MMP13P45452 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.76■□□□□ 0.75
MMP13P45452 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 ZNF815P-204ENST00000434898 1737 ntBASIC19.76■□□□□ 0.75
MMP13P45452 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.75■□□□□ 0.75
MMP13P45452 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP13P45452 AC090164.3-201ENST00000610780 2143 ntBASIC19.75■□□□□ 0.75
MMP13P45452 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP13P45452 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
MMP13P45452 PCDHB18P-201ENST00000524813 2368 ntBASIC19.75■□□□□ 0.75
MMP13P45452 AL133373.2-201ENST00000623187 2828 ntBASIC19.75■□□□□ 0.75
MMP13P45452 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.75■□□□□ 0.75
MMP13P45452 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.75■□□□□ 0.75
MMP13P45452 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP13P45452 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MMP13P45452 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MMP13P45452 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP13P45452 AC018470.1-201ENST00000624790 3129 ntBASIC19.75■□□□□ 0.75
MMP13P45452 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 HTR7P1-201ENST00000538670 1336 ntBASIC19.75■□□□□ 0.75
MMP13P45452 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MMP13P45452 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP13P45452 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MMP13P45452 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 UBE2SP1-201ENST00000450587 669 ntBASIC19.74■□□□□ 0.75
MMP13P45452 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP13P45452 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
MMP13P45452 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.74■□□□□ 0.75
MMP13P45452 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.74■□□□□ 0.75
MMP13P45452 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.74■□□□□ 0.75
MMP13P45452 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP13P45452 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MMP13P45452 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP13P45452 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MMP13P45452 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP13P45452 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
MMP13P45452 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP13P45452 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
MMP13P45452 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP13P45452 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP13P45452 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 RARRES2P10-201ENST00000564312 460 ntBASIC19.73■□□□□ 0.75
MMP13P45452 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MMP13P45452 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP13P45452 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms