Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCNFP41002 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCNFP41002 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNFP41002 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.11■□□□□ 0.65
CCNFP41002 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCNFP41002 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.11■□□□□ 0.65
CCNFP41002 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCNFP41002 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.11■□□□□ 0.65
CCNFP41002 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
CCNFP41002 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCNFP41002 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCNFP41002 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
CCNFP41002 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 AC004264.1-201ENST00000608354 794 ntBASIC19.1■□□□□ 0.65
CCNFP41002 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCNFP41002 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNFP41002 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCNFP41002 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNFP41002 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCNFP41002 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCNFP41002 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNFP41002 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 AC133681.1-201ENST00000465482 601 ntBASIC19.09■□□□□ 0.65
CCNFP41002 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNFP41002 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.09■□□□□ 0.65
CCNFP41002 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 AL023875.1-201ENST00000640777 796 ntBASIC19.09■□□□□ 0.65
CCNFP41002 AC083906.6-201ENST00000641366 219 ntBASIC19.09■□□□□ 0.65
CCNFP41002 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCNFP41002 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNFP41002 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNFP41002 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.08■□□□□ 0.65
CCNFP41002 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CCNFP41002 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.08■□□□□ 0.65
CCNFP41002 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.08■□□□□ 0.65
CCNFP41002 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CCNFP41002 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.08■□□□□ 0.65
CCNFP41002 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCNFP41002 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.08■□□□□ 0.65
CCNFP41002 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.08■□□□□ 0.65
CCNFP41002 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.08■□□□□ 0.64
CCNFP41002 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.08■□□□□ 0.64
CCNFP41002 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 KRT18P16-201ENST00000510337 1294 ntBASIC19.08■□□□□ 0.64
CCNFP41002 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.08■□□□□ 0.64
CCNFP41002 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms