Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 DUSP5P1-201ENST00000441325 1139 ntBASIC16.82■□□□□ 0.28
CHRNB4P30926 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNB4P30926 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNB4P30926 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNB4P30926 AL121894.2-201ENST00000602977 491 ntBASIC16.82■□□□□ 0.28
CHRNB4P30926 AC083849.1-201ENST00000615227 514 ntBASIC16.82■□□□□ 0.28
CHRNB4P30926 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB4P30926 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB4P30926 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB4P30926 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHRNB4P30926 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 TPM4P1-201ENST00000436100 807 ntBASIC16.81■□□□□ 0.28
CHRNB4P30926 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB4P30926 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB4P30926 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNB4P30926 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.81■□□□□ 0.28
CHRNB4P30926 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNB4P30926 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB4P30926 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHRNB4P30926 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
CHRNB4P30926 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB4P30926 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.8■□□□□ 0.28
CHRNB4P30926 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.8■□□□□ 0.28
CHRNB4P30926 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB4P30926 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNB4P30926 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB4P30926 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNB4P30926 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB4P30926 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB4P30926 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNB4P30926 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB4P30926 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB4P30926 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms