Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 AC073508.3-201ENST00000619697 1419 ntBASIC17.24■□□□□ 0.35
GDF1P27539 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.24■□□□□ 0.35
GDF1P27539 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 AL049597.2-201ENST00000565575 961 ntBASIC17.24■□□□□ 0.35
GDF1P27539 AL512604.3-201ENST00000569583 964 ntBASIC17.24■□□□□ 0.35
GDF1P27539 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.24■□□□□ 0.35
GDF1P27539 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.24■□□□□ 0.35
GDF1P27539 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.23■□□□□ 0.35
GDF1P27539 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDF1P27539 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.23■□□□□ 0.35
GDF1P27539 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GDF1P27539 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GDF1P27539 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.23■□□□□ 0.35
GDF1P27539 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
GDF1P27539 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
GDF1P27539 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.23■□□□□ 0.35
GDF1P27539 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.23■□□□□ 0.35
GDF1P27539 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF1P27539 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF1P27539 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GDF1P27539 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDF1P27539 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF1P27539 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF1P27539 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF1P27539 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDF1P27539 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
GDF1P27539 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.21■□□□□ 0.35
GDF1P27539 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GDF1P27539 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF1P27539 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GDF1P27539 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GDF1P27539 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.21■□□□□ 0.35
GDF1P27539 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
GDF1P27539 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.21■□□□□ 0.35
GDF1P27539 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF1P27539 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF1P27539 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.21■□□□□ 0.35
GDF1P27539 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GDF1P27539 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.21■□□□□ 0.35
GDF1P27539 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GDF1P27539 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
GDF1P27539 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GDF1P27539 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GDF1P27539 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GDF1P27539 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms