Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN3P26045 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 PRSS44-201ENST00000515154 1146 ntBASIC19.38■□□□□ 0.69
PTPN3P26045 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN3P26045 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN3P26045 MIR6786-201ENST00000616843 113 ntBASIC19.38■□□□□ 0.69
PTPN3P26045 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN3P26045 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN3P26045 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN3P26045 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN3P26045 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN3P26045 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN3P26045 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PTPN3P26045 AC233702.5-201ENST00000584107 538 ntBASIC19.37■□□□□ 0.69
PTPN3P26045 TMEM191A-211ENST00000637163 1067 ntBASIC19.37■□□□□ 0.69
PTPN3P26045 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPN3P26045 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTPN3P26045 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PTPN3P26045 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN3P26045 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN3P26045 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN3P26045 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 AC093525.10-201ENST00000625130 1569 ntBASIC19.36■□□□□ 0.69
PTPN3P26045 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN3P26045 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPN3P26045 AC012618.2-201ENST00000428058 849 ntBASIC19.36■□□□□ 0.69
PTPN3P26045 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 AC113410.3-201ENST00000623366 203 ntBASIC19.36■□□□□ 0.69
PTPN3P26045 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN3P26045 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN3P26045 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN3P26045 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
PTPN3P26045 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 AL138781.2-201ENST00000617896 1843 ntBASIC19.35■□□□□ 0.69
PTPN3P26045 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN3P26045 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 AL031598.1-201ENST00000561511 1773 ntBASIC19.35■□□□□ 0.69
PTPN3P26045 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN3P26045 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PTPN3P26045 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
PTPN3P26045 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPN3P26045 FAM207BP-201ENST00000447172 505 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms