Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMA1P25391 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMA1P25391 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMA1P25391 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
LAMA1P25391 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMA1P25391 TSPY19P-201ENST00000418461 509 ntBASIC18.6■□□□□ 0.57
LAMA1P25391 TSPY18P-201ENST00000441642 509 ntBASIC18.6■□□□□ 0.57
LAMA1P25391 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.6■□□□□ 0.57
LAMA1P25391 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMA1P25391 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.59■□□□□ 0.57
LAMA1P25391 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.59■□□□□ 0.57
LAMA1P25391 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.59■□□□□ 0.57
LAMA1P25391 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.59■□□□□ 0.57
LAMA1P25391 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.59■□□□□ 0.57
LAMA1P25391 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
LAMA1P25391 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LAMA1P25391 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.59■□□□□ 0.57
LAMA1P25391 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.59■□□□□ 0.57
LAMA1P25391 AL162377.1-201ENST00000618844 1793 ntBASIC18.59■□□□□ 0.57
LAMA1P25391 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.59■□□□□ 0.57
LAMA1P25391 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LAMA1P25391 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.59■□□□□ 0.57
LAMA1P25391 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
LAMA1P25391 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.58■□□□□ 0.57
LAMA1P25391 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LAMA1P25391 MRPL3P1-201ENST00000400109 1033 ntBASIC18.58■□□□□ 0.57
LAMA1P25391 TSPY22P-201ENST00000427496 604 ntBASIC18.58■□□□□ 0.57
LAMA1P25391 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.58■□□□□ 0.57
LAMA1P25391 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.58■□□□□ 0.57
LAMA1P25391 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.58■□□□□ 0.57
LAMA1P25391 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
LAMA1P25391 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LAMA1P25391 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LAMA1P25391 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LAMA1P25391 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LAMA1P25391 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.58■□□□□ 0.56
LAMA1P25391 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.58■□□□□ 0.56
LAMA1P25391 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LAMA1P25391 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LAMA1P25391 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LAMA1P25391 TSSC2-201ENST00000450217 709 ntBASIC18.58■□□□□ 0.56
LAMA1P25391 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LAMA1P25391 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.57■□□□□ 0.56
LAMA1P25391 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.57■□□□□ 0.56
LAMA1P25391 DRAXINP1-201ENST00000437611 948 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 SAPCD2P3-201ENST00000455031 850 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.57■□□□□ 0.56
LAMA1P25391 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LAMA1P25391 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 MIR574-201ENST00000385209 96 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 PMS2P1-201ENST00000431037 1228 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.57■□□□□ 0.56
LAMA1P25391 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LAMA1P25391 Z83836.1-201ENST00000624605 1642 ntBASIC18.57■□□□□ 0.56
LAMA1P25391 IL9RP2-201ENST00000423948 1312 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms