Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CCL4P13236 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.94■□□□□ 0.46
CCL4P13236 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.94■□□□□ 0.46
CCL4P13236 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.94■□□□□ 0.46
CCL4P13236 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL4P13236 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL4P13236 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL4P13236 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL4P13236 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCL4P13236 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCL4P13236 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.93■□□□□ 0.46
CCL4P13236 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL4P13236 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL4P13236 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL4P13236 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CCL4P13236 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL4P13236 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL4P13236 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL4P13236 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL4P13236 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 KRT8P3-201ENST00000519669 1449 ntBASIC17.92■□□□□ 0.46
CCL4P13236 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCL4P13236 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 SEC1P-202ENST00000473944 940 ntBASIC17.92■□□□□ 0.46
CCL4P13236 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.92■□□□□ 0.46
CCL4P13236 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 AC011498.5-201ENST00000592027 486 ntBASIC17.92■□□□□ 0.46
CCL4P13236 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCL4P13236 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL4P13236 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL4P13236 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL4P13236 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL4P13236 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCL4P13236 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CCL4P13236 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL4P13236 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.91■□□□□ 0.46
CCL4P13236 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.91■□□□□ 0.46
CCL4P13236 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 AC079602.3-201ENST00000623931 403 ntBASIC17.91■□□□□ 0.46
CCL4P13236 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCL4P13236 PCDHAC2-203ENST00000615316 3011 ntBASIC17.91■□□□□ 0.46
CCL4P13236 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL4P13236 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL4P13236 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCL4P13236 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms