Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.95■■□□□ 1.1
BMP3P12645 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
BMP3P12645 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
BMP3P12645 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.95■■□□□ 1.1
BMP3P12645 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.95■■□□□ 1.1
BMP3P12645 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.95■■□□□ 1.1
BMP3P12645 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.95■■□□□ 1.1
BMP3P12645 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.95■■□□□ 1.1
BMP3P12645 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.95■■□□□ 1.1
BMP3P12645 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.95■■□□□ 1.1
BMP3P12645 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.95■■□□□ 1.1
BMP3P12645 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
BMP3P12645 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.94■■□□□ 1.1
BMP3P12645 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.94■■□□□ 1.1
BMP3P12645 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.94■■□□□ 1.1
BMP3P12645 KRT18P38-201ENST00000449496 1282 ntBASIC21.94■■□□□ 1.1
BMP3P12645 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 GCSHP2-201ENST00000560971 527 ntBASIC21.94■■□□□ 1.1
BMP3P12645 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.94■■□□□ 1.1
BMP3P12645 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.94■■□□□ 1.1
BMP3P12645 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.94■■□□□ 1.1
BMP3P12645 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
BMP3P12645 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.94■■□□□ 1.1
BMP3P12645 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.94■■□□□ 1.1
BMP3P12645 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
BMP3P12645 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.93■■□□□ 1.1
BMP3P12645 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BMP3P12645 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.93■■□□□ 1.1
BMP3P12645 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.93■■□□□ 1.1
BMP3P12645 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.93■■□□□ 1.1
BMP3P12645 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.93■■□□□ 1.1
BMP3P12645 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.93■■□□□ 1.1
BMP3P12645 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.93■■□□□ 1.1
BMP3P12645 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.93■■□□□ 1.1
BMP3P12645 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
BMP3P12645 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.92■■□□□ 1.1
BMP3P12645 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.92■■□□□ 1.1
BMP3P12645 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.92■■□□□ 1.1
BMP3P12645 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.92■■□□□ 1.1
BMP3P12645 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.92■■□□□ 1.1
BMP3P12645 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.92■■□□□ 1.1
BMP3P12645 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
BMP3P12645 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.92■■□□□ 1.1
BMP3P12645 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.92■■□□□ 1.1
BMP3P12645 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BMP3P12645 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 AC036111.1-201ENST00000533973 1582 ntBASIC21.91■■□□□ 1.1
BMP3P12645 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.91■■□□□ 1.1
BMP3P12645 MCCD1P1-208ENST00000445732 328 ntBASIC21.91■■□□□ 1.1
BMP3P12645 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
BMP3P12645 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.91■■□□□ 1.1
BMP3P12645 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
BMP3P12645 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 FEM1AP3-201ENST00000403722 1741 ntBASIC21.91■■□□□ 1.1
BMP3P12645 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BMP3P12645 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BMP3P12645 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BMP3P12645 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms