Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SRFP11831 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.25■□□□□ 0.67
SRFP11831 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.25■□□□□ 0.67
SRFP11831 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.25■□□□□ 0.67
SRFP11831 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRFP11831 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SRFP11831 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFP11831 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 SDHAP1-207ENST00000440850 2000 ntBASIC19.24■□□□□ 0.67
SRFP11831 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.24■□□□□ 0.67
SRFP11831 AC005332.3-201ENST00000589904 676 ntBASIC19.24■□□□□ 0.67
SRFP11831 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFP11831 Z69720.1-201ENST00000601483 472 ntBASIC19.24■□□□□ 0.67
SRFP11831 IGHV3-41-201ENST00000613121 348 ntBASIC19.24■□□□□ 0.67
SRFP11831 BX640515.1-201ENST00000617215 977 ntBASIC19.24■□□□□ 0.67
SRFP11831 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFP11831 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFP11831 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 KRT8P7-201ENST00000533003 1432 ntBASIC19.24■□□□□ 0.67
SRFP11831 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFP11831 HLA-A-201ENST00000376802 1334 ntBASIC19.24■□□□□ 0.67
SRFP11831 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SRFP11831 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SRFP11831 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 AC233702.3-201ENST00000578656 1387 ntBASIC19.23■□□□□ 0.67
SRFP11831 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SRFP11831 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFP11831 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.23■□□□□ 0.67
SRFP11831 AP003733.1-201ENST00000491725 852 ntBASIC19.23■□□□□ 0.67
SRFP11831 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.23■□□□□ 0.67
SRFP11831 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.23■□□□□ 0.67
SRFP11831 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.23■□□□□ 0.67
SRFP11831 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
SRFP11831 AC099336.1-202ENST00000602961 463 ntBASIC19.23■□□□□ 0.67
SRFP11831 AL390719.2-201ENST00000606993 987 ntBASIC19.23■□□□□ 0.67
SRFP11831 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SRFP11831 AC117500.6-201ENST00000624871 588 ntBASIC19.23■□□□□ 0.67
SRFP11831 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFP11831 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 AL512408.1-201ENST00000569378 2000 ntBASIC19.23■□□□□ 0.67
SRFP11831 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 LINC00167-201ENST00000530583 1419 ntBASIC19.23■□□□□ 0.67
SRFP11831 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRFP11831 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.22■□□□□ 0.67
SRFP11831 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFP11831 AC010240.3-201ENST00000607688 395 ntBASIC19.22■□□□□ 0.67
SRFP11831 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRFP11831 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFP11831 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SRFP11831 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFP11831 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFP11831 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRFP11831 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRFP11831 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFP11831 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFP11831 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFP11831 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SRFP11831 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms