Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RBP1P09455 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.74■□□□□ 0.59
RBP1P09455 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RBP1P09455 AC104581.1-202ENST00000635932 2618 ntBASIC18.74■□□□□ 0.59
RBP1P09455 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RBP1P09455 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RBP1P09455 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RBP1P09455 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RBP1P09455 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.73■□□□□ 0.59
RBP1P09455 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RBP1P09455 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.73■□□□□ 0.59
RBP1P09455 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.73■□□□□ 0.59
RBP1P09455 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RBP1P09455 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.73■□□□□ 0.59
RBP1P09455 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.73■□□□□ 0.59
RBP1P09455 AC008403.3-201ENST00000598924 454 ntBASIC18.73■□□□□ 0.59
RBP1P09455 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 AC092666.2-201ENST00000613287 246 ntBASIC18.73■□□□□ 0.59
RBP1P09455 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.73■□□□□ 0.59
RBP1P09455 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RBP1P09455 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RBP1P09455 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.73■□□□□ 0.59
RBP1P09455 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
RBP1P09455 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
RBP1P09455 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
RBP1P09455 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 KRT17P3-201ENST00000420566 1262 ntBASIC18.72■□□□□ 0.59
RBP1P09455 TSPY23P-201ENST00000440136 739 ntBASIC18.72■□□□□ 0.59
RBP1P09455 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.72■□□□□ 0.59
RBP1P09455 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RBP1P09455 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 AC090340.1-201ENST00000620778 4980 ntBASIC18.72■□□□□ 0.59
RBP1P09455 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RBP1P09455 ANO7L1-203ENST00000602586 1720 ntBASIC18.71■□□□□ 0.59
RBP1P09455 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RBP1P09455 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RBP1P09455 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RBP1P09455 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.71■□□□□ 0.59
RBP1P09455 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.71■□□□□ 0.59
RBP1P09455 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.71■□□□□ 0.59
RBP1P09455 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.71■□□□□ 0.59
RBP1P09455 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RBP1P09455 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 AC005082.1-201ENST00000413042 2259 ntBASIC18.71■□□□□ 0.59
RBP1P09455 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RBP1P09455 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.71■□□□□ 0.59
RBP1P09455 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.71■□□□□ 0.59
RBP1P09455 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms