Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.68■□□□□ 0.74
RHOP08100 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHOP08100 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.67■□□□□ 0.74
RHOP08100 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHOP08100 AC026396.1-201ENST00000419388 421 ntBASIC19.67■□□□□ 0.74
RHOP08100 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RHOP08100 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 AC011498.5-201ENST00000592027 486 ntBASIC19.67■□□□□ 0.74
RHOP08100 AC112497.1-201ENST00000624824 639 ntBASIC19.67■□□□□ 0.74
RHOP08100 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.67■□□□□ 0.74
RHOP08100 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHOP08100 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.66■□□□□ 0.74
RHOP08100 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.66■□□□□ 0.74
RHOP08100 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 AL691432.3-201ENST00000621860 400 ntBASIC19.66■□□□□ 0.74
RHOP08100 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 Z82202.1-201ENST00000623446 1880 ntBASIC19.66■□□□□ 0.74
RHOP08100 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RHOP08100 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
RHOP08100 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHOP08100 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RHOP08100 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.65■□□□□ 0.74
RHOP08100 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.65■□□□□ 0.74
RHOP08100 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.65■□□□□ 0.74
RHOP08100 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 TSSC2-201ENST00000450217 709 ntBASIC19.65■□□□□ 0.74
RHOP08100 BX276092.5-203ENST00000456199 560 ntBASIC19.65■□□□□ 0.74
RHOP08100 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms