Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 SLC25A1P4-201ENST00000567977 778 ntBASIC19.29■□□□□ 0.68
HLA-DQB2P05538 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 MFAP1P1-201ENST00000442257 1255 ntBASIC19.28■□□□□ 0.68
HLA-DQB2P05538 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 AL355075.4-201ENST00000554988 638 ntBASIC19.28■□□□□ 0.68
HLA-DQB2P05538 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-DQB2P05538 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 AC120498.9-201ENST00000339021 3867 ntBASIC19.27■□□□□ 0.68
HLA-DQB2P05538 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 AL596275.1-201ENST00000423464 877 ntBASIC19.27■□□□□ 0.68
HLA-DQB2P05538 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HLA-DQB2P05538 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
HLA-DQB2P05538 AC079598.2-202ENST00000546624 1451 ntBASIC19.27■□□□□ 0.67
HLA-DQB2P05538 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DQB2P05538 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
HLA-DQB2P05538 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 AC093503.3-201ENST00000624917 2352 ntBASIC19.26■□□□□ 0.67
HLA-DQB2P05538 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 TSPY15P-201ENST00000457163 923 ntBASIC19.26■□□□□ 0.67
HLA-DQB2P05538 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 AP000525.1-201ENST00000608286 694 ntBASIC19.26■□□□□ 0.67
HLA-DQB2P05538 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQB2P05538 AC004408.2-201ENST00000623613 2777 ntBASIC19.26■□□□□ 0.67
HLA-DQB2P05538 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 CROCCP3-202ENST00000420820 1947 ntBASIC19.25■□□□□ 0.67
HLA-DQB2P05538 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms