Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CHGBP05060 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.85■■□□□ 1.25
CHGBP05060 KRT18P21-201ENST00000515767 1272 ntBASIC22.85■■□□□ 1.25
CHGBP05060 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.85■■□□□ 1.25
CHGBP05060 AL353719.1-201ENST00000566847 864 ntBASIC22.85■■□□□ 1.25
CHGBP05060 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.85■■□□□ 1.25
CHGBP05060 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHGBP05060 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.85■■□□□ 1.25
CHGBP05060 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CHGBP05060 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CHGBP05060 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CHGBP05060 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHGBP05060 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CHGBP05060 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.85■■□□□ 1.25
CHGBP05060 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
CHGBP05060 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CHGBP05060 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.84■■□□□ 1.25
CHGBP05060 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 GPAT2P1-201ENST00000444924 1672 ntBASIC22.84■■□□□ 1.25
CHGBP05060 AC073508.3-201ENST00000619697 1419 ntBASIC22.84■■□□□ 1.25
CHGBP05060 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
CHGBP05060 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.84■■□□□ 1.25
CHGBP05060 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 SLC25A3P1-201ENST00000443844 931 ntBASIC22.84■■□□□ 1.25
CHGBP05060 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.84■■□□□ 1.25
CHGBP05060 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.84■■□□□ 1.25
CHGBP05060 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.84■■□□□ 1.25
CHGBP05060 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
CHGBP05060 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.84■■□□□ 1.25
CHGBP05060 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CHGBP05060 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.84■■□□□ 1.25
CHGBP05060 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHGBP05060 AP000974.1-201ENST00000623909 2387 ntBASIC22.84■■□□□ 1.25
CHGBP05060 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.84■■□□□ 1.25
CHGBP05060 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
CHGBP05060 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.83■■□□□ 1.25
CHGBP05060 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.83■■□□□ 1.25
CHGBP05060 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.83■■□□□ 1.25
CHGBP05060 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.83■■□□□ 1.25
CHGBP05060 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.83■■□□□ 1.25
CHGBP05060 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.83■■□□□ 1.25
CHGBP05060 RN7SL850P-201ENST00000579959 291 ntBASIC22.83■■□□□ 1.25
CHGBP05060 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.83■■□□□ 1.25
CHGBP05060 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHGBP05060 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHGBP05060 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CHGBP05060 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.82■■□□□ 1.24
CHGBP05060 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.82■■□□□ 1.24
CHGBP05060 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 TERF1P1-201ENST00000311003 1181 ntBASIC22.82■■□□□ 1.24
CHGBP05060 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CHGBP05060 SLC25A1P2-201ENST00000430693 912 ntBASIC22.82■■□□□ 1.24
CHGBP05060 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CHGBP05060 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.82■■□□□ 1.24
CHGBP05060 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHGBP05060 KRT8P45-201ENST00000414328 1447 ntBASIC22.82■■□□□ 1.24
CHGBP05060 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CHGBP05060 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CHGBP05060 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CHGBP05060 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CHGBP05060 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.81■■□□□ 1.24
CHGBP05060 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.81■■□□□ 1.24
CHGBP05060 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.81■■□□□ 1.24
CHGBP05060 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.81■■□□□ 1.24
CHGBP05060 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CHGBP05060 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms