Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 BX276092.5-203ENST00000456199 560 ntBASIC21■□□□□ 0.95
CD4P01730 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21■□□□□ 0.95
CD4P01730 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CD4P01730 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21■□□□□ 0.95
CD4P01730 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 AC111152.3-201ENST00000569699 673 ntBASIC21■□□□□ 0.95
CD4P01730 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CD4P01730 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21■□□□□ 0.95
CD4P01730 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CD4P01730 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CD4P01730 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.99■□□□□ 0.95
CD4P01730 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 AC004870.1-201ENST00000315132 882 ntBASIC20.99■□□□□ 0.95
CD4P01730 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.99■□□□□ 0.95
CD4P01730 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
CD4P01730 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
CD4P01730 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.99■□□□□ 0.95
CD4P01730 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.99■□□□□ 0.95
CD4P01730 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CD4P01730 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.99■□□□□ 0.95
CD4P01730 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CD4P01730 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD4P01730 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CD4P01730 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CD4P01730 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CD4P01730 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.98■□□□□ 0.95
CD4P01730 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.98■□□□□ 0.95
CD4P01730 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.98■□□□□ 0.95
CD4P01730 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.98■□□□□ 0.95
CD4P01730 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD4P01730 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.98■□□□□ 0.95
CD4P01730 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CD4P01730 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.97■□□□□ 0.95
CD4P01730 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.97■□□□□ 0.95
CD4P01730 AP000347.1-202ENST00000435868 847 ntBASIC20.97■□□□□ 0.95
CD4P01730 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 FAAHP1-202ENST00000446499 1238 ntBASIC20.97■□□□□ 0.95
CD4P01730 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.97■□□□□ 0.95
CD4P01730 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.97■□□□□ 0.95
CD4P01730 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CD4P01730 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD4P01730 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CD4P01730 KRT8P10-201ENST00000450021 1447 ntBASIC20.96■□□□□ 0.95
CD4P01730 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD4P01730 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms