Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT4O95628 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT4O95628 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT4O95628 AC128688.1-201ENST00000487626 519 ntBASIC16.88■□□□□ 0.29
CNOT4O95628 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.88■□□□□ 0.29
CNOT4O95628 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT4O95628 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT4O95628 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CNOT4O95628 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT4O95628 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNOT4O95628 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT4O95628 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT4O95628 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT4O95628 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 AC020763.4-201ENST00000623414 4170 ntBASIC16.88■□□□□ 0.29
CNOT4O95628 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CNOT4O95628 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT4O95628 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CNOT4O95628 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT4O95628 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.87■□□□□ 0.29
CNOT4O95628 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CNOT4O95628 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT4O95628 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CNOT4O95628 KRT18P22-201ENST00000402024 1347 ntBASIC16.87■□□□□ 0.29
CNOT4O95628 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.87■□□□□ 0.29
CNOT4O95628 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT4O95628 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT4O95628 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CNOT4O95628 AC005521.1-201ENST00000393351 872 ntBASIC16.86■□□□□ 0.29
CNOT4O95628 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 AL390955.1-201ENST00000428694 934 ntBASIC16.86■□□□□ 0.29
CNOT4O95628 CCR12P-201ENST00000446203 998 ntBASIC16.86■□□□□ 0.29
CNOT4O95628 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.86■□□□□ 0.29
CNOT4O95628 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT4O95628 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.86■□□□□ 0.29
CNOT4O95628 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CNOT4O95628 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.86■□□□□ 0.29
CNOT4O95628 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CNOT4O95628 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT4O95628 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT4O95628 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT4O95628 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT4O95628 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT4O95628 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT4O95628 AC125437.2-201ENST00000625180 2167 ntBASIC16.85■□□□□ 0.29
CNOT4O95628 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CNOT4O95628 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNOT4O95628 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms