Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDRT1O95170 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT1O95170 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT1O95170 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDRT1O95170 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT1O95170 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
CDRT1O95170 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CDRT1O95170 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.96■□□□□ 0.3
CDRT1O95170 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT1O95170 AC068338.2-201ENST00000563278 1430 ntBASIC16.96■□□□□ 0.3
CDRT1O95170 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDRT1O95170 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDRT1O95170 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 PKD1P1-201ENST00000458669 6805 ntBASIC16.95■□□□□ 0.3
CDRT1O95170 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.95■□□□□ 0.3
CDRT1O95170 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDRT1O95170 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 KRT18P68-201ENST00000392293 1000 ntBASIC16.95■□□□□ 0.3
CDRT1O95170 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDRT1O95170 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.95■□□□□ 0.3
CDRT1O95170 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.95■□□□□ 0.3
CDRT1O95170 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDRT1O95170 AC011767.1-201ENST00000617410 1153 ntBASIC16.95■□□□□ 0.3
CDRT1O95170 AC105020.6-201ENST00000621523 1217 ntBASIC16.95■□□□□ 0.3
CDRT1O95170 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.95■□□□□ 0.3
CDRT1O95170 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 ANO7L1-203ENST00000602586 1720 ntBASIC16.95■□□□□ 0.3
CDRT1O95170 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CDRT1O95170 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDRT1O95170 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDRT1O95170 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDRT1O95170 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDRT1O95170 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDRT1O95170 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.94■□□□□ 0.3
CDRT1O95170 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.94■□□□□ 0.3
CDRT1O95170 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.94■□□□□ 0.3
CDRT1O95170 KRT18P5-201ENST00000436075 1291 ntBASIC16.94■□□□□ 0.3
CDRT1O95170 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.94■□□□□ 0.3
CDRT1O95170 DUX4L16-201ENST00000555130 1264 ntBASIC16.94■□□□□ 0.3
CDRT1O95170 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.94■□□□□ 0.3
CDRT1O95170 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDRT1O95170 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.94■□□□□ 0.3
CDRT1O95170 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDRT1O95170 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.94■□□□□ 0.3
CDRT1O95170 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.93■□□□□ 0.3
CDRT1O95170 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDRT1O95170 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.93■□□□□ 0.3
CDRT1O95170 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.93■□□□□ 0.3
CDRT1O95170 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.93■□□□□ 0.3
CDRT1O95170 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.93■□□□□ 0.3
CDRT1O95170 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.93■□□□□ 0.3
CDRT1O95170 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDRT1O95170 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDRT1O95170 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDRT1O95170 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDRT1O95170 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms