Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.83■□□□□ 0.6
SUPT3HO75486 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.83■□□□□ 0.6
SUPT3HO75486 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.83■□□□□ 0.6
SUPT3HO75486 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.83■□□□□ 0.6
SUPT3HO75486 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.83■□□□□ 0.6
SUPT3HO75486 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.83■□□□□ 0.6
SUPT3HO75486 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.83■□□□□ 0.6
SUPT3HO75486 AC008403.3-201ENST00000598924 454 ntBASIC18.83■□□□□ 0.6
SUPT3HO75486 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.83■□□□□ 0.6
SUPT3HO75486 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SUPT3HO75486 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 IRX1P1-201ENST00000438849 1838 ntBASIC18.83■□□□□ 0.6
SUPT3HO75486 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 NBPF21P-201ENST00000425093 1451 ntBASIC18.83■□□□□ 0.6
SUPT3HO75486 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUPT3HO75486 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SUPT3HO75486 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SUPT3HO75486 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SUPT3HO75486 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SUPT3HO75486 ID1-201ENST00000376105 1233 ntBASIC18.82■□□□□ 0.6
SUPT3HO75486 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.82■□□□□ 0.6
SUPT3HO75486 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.82■□□□□ 0.6
SUPT3HO75486 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.82■□□□□ 0.6
SUPT3HO75486 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SUPT3HO75486 CROCCP3-202ENST00000420820 1947 ntBASIC18.82■□□□□ 0.6
SUPT3HO75486 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
SUPT3HO75486 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUPT3HO75486 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 FP475955.4-201ENST00000623131 1990 ntBASIC18.81■□□□□ 0.6
SUPT3HO75486 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SUPT3HO75486 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
SUPT3HO75486 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.81■□□□□ 0.6
SUPT3HO75486 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.81■□□□□ 0.6
SUPT3HO75486 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUPT3HO75486 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.81■□□□□ 0.6
SUPT3HO75486 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SUPT3HO75486 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
SUPT3HO75486 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.8■□□□□ 0.6
SUPT3HO75486 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SUPT3HO75486 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SUPT3HO75486 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SUPT3HO75486 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.8■□□□□ 0.6
SUPT3HO75486 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.8■□□□□ 0.6
SUPT3HO75486 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.8■□□□□ 0.6
SUPT3HO75486 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
SUPT3HO75486 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.8■□□□□ 0.6
SUPT3HO75486 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.8■□□□□ 0.6
SUPT3HO75486 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SUPT3HO75486 AC069544.1-201ENST00000609399 999 ntBASIC18.8■□□□□ 0.6
SUPT3HO75486 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms