Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNA5SP415-201ENST00000517246 115 ntBASIC8.49□□□□□ -1.05
USH2AO75445 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 AC012640.2-201ENST00000561606 901 ntBASIC8.49□□□□□ -1.05
USH2AO75445 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC8.49□□□□□ -1.05
USH2AO75445 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC8.48□□□□□ -1.05
USH2AO75445 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
USH2AO75445 AL645939.2-201ENST00000427340 991 ntBASIC8.48□□□□□ -1.05
USH2AO75445 AC132008.2-207ENST00000454517 770 ntBASIC8.48□□□□□ -1.05
USH2AO75445 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
USH2AO75445 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC8.48□□□□□ -1.05
USH2AO75445 CDV3-207ENST00000508481 661 ntTSL 3 BASIC8.48□□□□□ -1.05
USH2AO75445 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC8.48□□□□□ -1.05
USH2AO75445 AL160286.2-201ENST00000567150 934 ntBASIC8.48□□□□□ -1.05
USH2AO75445 TREX1-205ENST00000625293 1783 ntBASIC8.48□□□□□ -1.05
USH2AO75445 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 AC233702.3-201ENST00000578656 1387 ntBASIC8.48□□□□□ -1.05
USH2AO75445 KRT8P11-201ENST00000409686 1436 ntBASIC8.48□□□□□ -1.05
USH2AO75445 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC8.48□□□□□ -1.05
USH2AO75445 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC8.48□□□□□ -1.05
USH2AO75445 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC8.48□□□□□ -1.05
USH2AO75445 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC8.48□□□□□ -1.05
USH2AO75445 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
USH2AO75445 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC8.48□□□□□ -1.05
USH2AO75445 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
USH2AO75445 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC8.47□□□□□ -1.05
USH2AO75445 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 SMG8-203ENST00000578922 2178 ntBASIC8.47□□□□□ -1.05
USH2AO75445 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
USH2AO75445 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
USH2AO75445 AC005336.2-201ENST00000593183 939 ntBASIC8.47□□□□□ -1.05
USH2AO75445 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 ORC5-208ENST00000626700 344 ntTSL 3 BASIC8.47□□□□□ -1.05
USH2AO75445 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 MYB-221ENST00000527615 2381 ntTSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms