Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDCD6O75340 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.06■□□□□ 0.16
PDCD6O75340 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.06■□□□□ 0.16
PDCD6O75340 POM121L13P-201ENST00000422362 380 ntBASIC16.06■□□□□ 0.16
PDCD6O75340 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.06■□□□□ 0.16
PDCD6O75340 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDCD6O75340 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDCD6O75340 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
PDCD6O75340 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PDCD6O75340 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDCD6O75340 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 ANO7L1-203ENST00000602586 1720 ntBASIC16.05■□□□□ 0.16
PDCD6O75340 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDCD6O75340 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PDCD6O75340 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 AC135050.7-201ENST00000624508 2218 ntBASIC16.05■□□□□ 0.16
PDCD6O75340 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDCD6O75340 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.05■□□□□ 0.16
PDCD6O75340 AL160286.2-201ENST00000567150 934 ntBASIC16.05■□□□□ 0.16
PDCD6O75340 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDCD6O75340 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.05■□□□□ 0.16
PDCD6O75340 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PDCD6O75340 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDCD6O75340 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDCD6O75340 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.04■□□□□ 0.16
PDCD6O75340 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.04■□□□□ 0.16
PDCD6O75340 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDCD6O75340 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDCD6O75340 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.04■□□□□ 0.16
PDCD6O75340 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.04■□□□□ 0.16
PDCD6O75340 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PDCD6O75340 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.04■□□□□ 0.16
PDCD6O75340 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PDCD6O75340 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.04■□□□□ 0.16
PDCD6O75340 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms