Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CACNA1FO60840 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CACNA1FO60840 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CACNA1FO60840 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
CACNA1FO60840 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.94■■□□□ 1.42
CACNA1FO60840 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CACNA1FO60840 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CACNA1FO60840 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.94■■□□□ 1.42
CACNA1FO60840 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.94■■□□□ 1.42
CACNA1FO60840 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.94■■□□□ 1.42
CACNA1FO60840 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CACNA1FO60840 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CACNA1FO60840 AL109659.2-201ENST00000606809 1674 ntBASIC23.94■■□□□ 1.42
CACNA1FO60840 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
CACNA1FO60840 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.93■■□□□ 1.42
CACNA1FO60840 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.93■■□□□ 1.42
CACNA1FO60840 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.93■■□□□ 1.42
CACNA1FO60840 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CACNA1FO60840 KRT8P32-201ENST00000512863 1461 ntBASIC23.93■■□□□ 1.42
CACNA1FO60840 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.93■■□□□ 1.42
CACNA1FO60840 RCC2P3-201ENST00000418112 1537 ntBASIC23.93■■□□□ 1.42
CACNA1FO60840 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CACNA1FO60840 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.93■■□□□ 1.42
CACNA1FO60840 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CACNA1FO60840 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 STARP1-201ENST00000397973 869 ntBASIC23.92■■□□□ 1.42
CACNA1FO60840 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.92■■□□□ 1.42
CACNA1FO60840 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.92■■□□□ 1.42
CACNA1FO60840 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CACNA1FO60840 AL049597.2-201ENST00000565575 961 ntBASIC23.92■■□□□ 1.42
CACNA1FO60840 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CACNA1FO60840 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CACNA1FO60840 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 Z98044.1-201ENST00000632503 1764 ntBASIC23.92■■□□□ 1.42
CACNA1FO60840 AL023284.2-201ENST00000405850 579 ntBASIC23.92■■□□□ 1.42
CACNA1FO60840 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CACNA1FO60840 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.91■■□□□ 1.42
CACNA1FO60840 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.91■■□□□ 1.42
CACNA1FO60840 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.91■■□□□ 1.42
CACNA1FO60840 AC005363.2-201ENST00000618631 242 ntBASIC23.91■■□□□ 1.42
CACNA1FO60840 AL023973.1-201ENST00000624619 620 ntBASIC23.91■■□□□ 1.42
CACNA1FO60840 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CACNA1FO60840 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CACNA1FO60840 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.91■■□□□ 1.42
CACNA1FO60840 ATP5G1P1-201ENST00000448724 379 ntBASIC23.91■■□□□ 1.42
CACNA1FO60840 COX11P1-201ENST00000489116 835 ntBASIC23.91■■□□□ 1.42
CACNA1FO60840 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.91■■□□□ 1.42
CACNA1FO60840 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 FAM8A6P-201ENST00000407496 1135 ntBASIC23.9■■□□□ 1.42
CACNA1FO60840 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.9■■□□□ 1.42
CACNA1FO60840 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CACNA1FO60840 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms