Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCL13O43927 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.03■□□□□ 0.32
CXCL13O43927 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CXCL13O43927 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.02■□□□□ 0.32
CXCL13O43927 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCL13O43927 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.02■□□□□ 0.32
CXCL13O43927 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXCL13O43927 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 ECEL1P2-202ENST00000465689 757 ntBASIC17.02■□□□□ 0.32
CXCL13O43927 CA15P1-201ENST00000481698 905 ntBASIC17.02■□□□□ 0.32
CXCL13O43927 AC128688.1-201ENST00000487626 519 ntBASIC17.02■□□□□ 0.32
CXCL13O43927 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.02■□□□□ 0.32
CXCL13O43927 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.02■□□□□ 0.32
CXCL13O43927 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
CXCL13O43927 IRX1P1-201ENST00000438849 1838 ntBASIC17.02■□□□□ 0.31
CXCL13O43927 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CXCL13O43927 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CXCL13O43927 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CXCL13O43927 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.02■□□□□ 0.31
CXCL13O43927 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CXCL13O43927 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CXCL13O43927 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CXCL13O43927 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CXCL13O43927 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.01■□□□□ 0.31
CXCL13O43927 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCL13O43927 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.01■□□□□ 0.31
CXCL13O43927 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCL13O43927 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CXCL13O43927 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17■□□□□ 0.31
CXCL13O43927 TSPY17P-201ENST00000450329 467 ntBASIC17■□□□□ 0.31
CXCL13O43927 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 AL023803.3-201ENST00000615559 522 ntBASIC17■□□□□ 0.31
CXCL13O43927 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CXCL13O43927 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17■□□□□ 0.31
CXCL13O43927 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 UBQLN4P1-201ENST00000461599 1801 ntBASIC17■□□□□ 0.31
CXCL13O43927 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17■□□□□ 0.31
CXCL13O43927 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CXCL13O43927 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CXCL13O43927 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCL13O43927 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCL13O43927 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCL13O43927 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCL13O43927 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCL13O43927 FEM1AP3-201ENST00000403722 1741 ntBASIC16.99■□□□□ 0.31
CXCL13O43927 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CXCL13O43927 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCL13O43927 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CXCL13O43927 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms