Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VEGFDO43915 AC113347.1-201ENST00000413321 391 ntBASIC18.65■□□□□ 0.58
VEGFDO43915 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.65■□□□□ 0.58
VEGFDO43915 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VEGFDO43915 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.64■□□□□ 0.58
VEGFDO43915 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VEGFDO43915 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.64■□□□□ 0.57
VEGFDO43915 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
VEGFDO43915 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VEGFDO43915 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.64■□□□□ 0.57
VEGFDO43915 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VEGFDO43915 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.63■□□□□ 0.57
VEGFDO43915 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
VEGFDO43915 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
VEGFDO43915 LIN28AP1-201ENST00000429574 405 ntBASIC18.63■□□□□ 0.57
VEGFDO43915 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.63■□□□□ 0.57
VEGFDO43915 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VEGFDO43915 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.63■□□□□ 0.57
VEGFDO43915 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.63■□□□□ 0.57
VEGFDO43915 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.63■□□□□ 0.57
VEGFDO43915 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
VEGFDO43915 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VEGFDO43915 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VEGFDO43915 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.63■□□□□ 0.57
VEGFDO43915 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VEGFDO43915 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 AL137013.1-201ENST00000432946 1228 ntBASIC18.62■□□□□ 0.57
VEGFDO43915 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.62■□□□□ 0.57
VEGFDO43915 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.62■□□□□ 0.57
VEGFDO43915 AC008622.2-201ENST00000617006 1229 ntBASIC18.62■□□□□ 0.57
VEGFDO43915 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
VEGFDO43915 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VEGFDO43915 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
VEGFDO43915 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VEGFDO43915 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VEGFDO43915 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VEGFDO43915 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.61■□□□□ 0.57
VEGFDO43915 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VEGFDO43915 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VEGFDO43915 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.61■□□□□ 0.57
VEGFDO43915 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VEGFDO43915 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VEGFDO43915 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VEGFDO43915 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VEGFDO43915 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.61■□□□□ 0.57
VEGFDO43915 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms