Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.29■□□□□ 0.68
KDELR3O43731 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.28■□□□□ 0.68
KDELR3O43731 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KDELR3O43731 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.28■□□□□ 0.68
KDELR3O43731 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.28■□□□□ 0.68
KDELR3O43731 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.28■□□□□ 0.68
KDELR3O43731 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.28■□□□□ 0.68
KDELR3O43731 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.28■□□□□ 0.68
KDELR3O43731 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.28■□□□□ 0.68
KDELR3O43731 FAM87A-204ENST00000613235 858 ntBASIC19.28■□□□□ 0.68
KDELR3O43731 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.28■□□□□ 0.68
KDELR3O43731 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KDELR3O43731 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KDELR3O43731 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.28■□□□□ 0.68
KDELR3O43731 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KDELR3O43731 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.28■□□□□ 0.68
KDELR3O43731 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KDELR3O43731 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KDELR3O43731 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDELR3O43731 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.27■□□□□ 0.68
KDELR3O43731 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KDELR3O43731 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.27■□□□□ 0.68
KDELR3O43731 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.27■□□□□ 0.68
KDELR3O43731 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.27■□□□□ 0.68
KDELR3O43731 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.27■□□□□ 0.68
KDELR3O43731 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.27■□□□□ 0.68
KDELR3O43731 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
KDELR3O43731 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDELR3O43731 AL049812.1-201ENST00000432563 2267 ntBASIC19.27■□□□□ 0.68
KDELR3O43731 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
KDELR3O43731 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KDELR3O43731 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KDELR3O43731 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.26■□□□□ 0.67
KDELR3O43731 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.26■□□□□ 0.67
KDELR3O43731 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.26■□□□□ 0.67
KDELR3O43731 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.26■□□□□ 0.67
KDELR3O43731 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
KDELR3O43731 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
KDELR3O43731 AC005363.2-201ENST00000618631 242 ntBASIC19.26■□□□□ 0.67
KDELR3O43731 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KDELR3O43731 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.26■□□□□ 0.67
KDELR3O43731 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KDELR3O43731 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
KDELR3O43731 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.26■□□□□ 0.67
KDELR3O43731 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KDELR3O43731 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KDELR3O43731 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
KDELR3O43731 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.25■□□□□ 0.67
KDELR3O43731 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.25■□□□□ 0.67
KDELR3O43731 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 AL512353.2-201ENST00000448759 1962 ntBASIC19.25■□□□□ 0.67
KDELR3O43731 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.25■□□□□ 0.67
KDELR3O43731 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.25■□□□□ 0.67
KDELR3O43731 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
KDELR3O43731 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KDELR3O43731 HMGA1P5-201ENST00000412453 271 ntBASIC19.25■□□□□ 0.67
KDELR3O43731 SLC25A3P1-201ENST00000443844 931 ntBASIC19.25■□□□□ 0.67
KDELR3O43731 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KDELR3O43731 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms