Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDH17O14917 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH17O14917 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDH17O14917 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCDH17O14917 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
PCDH17O14917 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH17O14917 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDH17O14917 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDH17O14917 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 MESTP1-201ENST00000404287 994 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH17O14917 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDH17O14917 NAPSB-206ENST00000562112 1266 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH17O14917 AL160286.2-201ENST00000567150 934 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 AC145285.6-201ENST00000604632 637 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 AP000525.1-201ENST00000608286 694 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 AP000692.2-201ENST00000608391 879 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 AC130371.2-201ENST00000619443 611 ntBASIC18.14■□□□□ 0.49
PCDH17O14917 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH17O14917 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PCDH17O14917 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PCDH17O14917 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH17O14917 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH17O14917 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH17O14917 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH17O14917 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH17O14917 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH17O14917 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH17O14917 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 C2orf69P3-201ENST00000565542 1120 ntBASIC18.13■□□□□ 0.49
PCDH17O14917 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDH17O14917 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH17O14917 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH17O14917 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH17O14917 RCC2P6-201ENST00000526625 1557 ntBASIC18.13■□□□□ 0.49
PCDH17O14917 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDH17O14917 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH17O14917 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 RCN1P1-201ENST00000400413 996 ntBASIC18.12■□□□□ 0.49
PCDH17O14917 MIR1238-201ENST00000408483 83 ntBASIC18.12■□□□□ 0.49
PCDH17O14917 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH17O14917 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH17O14917 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH17O14917 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH17O14917 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH17O14917 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH17O14917 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDH17O14917 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDH17O14917 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDH17O14917 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH17O14917 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
PCDH17O14917 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms