Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TPM1-218ENST00000559281 851 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD2O14647 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD2O14647 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD2O14647 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC26.47■■□□□ 1.83
CHD2O14647 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC26.47■■□□□ 1.83
CHD2O14647 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD2O14647 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC26.47■■□□□ 1.83
CHD2O14647 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CHD2O14647 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CHD2O14647 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD2O14647 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD2O14647 AC020907.5-201ENST00000624372 1936 ntBASIC26.47■■□□□ 1.83
CHD2O14647 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD2O14647 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CHD2O14647 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD2O14647 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD2O14647 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 NUS1P2-201ENST00000417358 873 ntBASIC26.46■■□□□ 1.83
CHD2O14647 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.46■■□□□ 1.83
CHD2O14647 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CHD2O14647 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.46■■□□□ 1.83
CHD2O14647 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD2O14647 TLE1-202ENST00000376484 666 ntTSL 3 BASIC26.46■■□□□ 1.83
CHD2O14647 AC018712.1-201ENST00000455767 687 ntBASIC26.46■■□□□ 1.83
CHD2O14647 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD2O14647 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
CHD2O14647 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD2O14647 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC26.45■■□□□ 1.83
CHD2O14647 ENSA-205ENST00000361532 792 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD2O14647 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD2O14647 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD2O14647 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD2O14647 DET1-207ENST00000564406 2315 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD2O14647 SDHAP1-207ENST00000440850 2000 ntBASIC26.45■■□□□ 1.82
CHD2O14647 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CHD2O14647 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.44■■□□□ 1.82
CHD2O14647 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 AP003733.1-201ENST00000491725 852 ntBASIC26.44■■□□□ 1.82
CHD2O14647 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
CHD2O14647 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD2O14647 KRT18P67-201ENST00000432816 1264 ntBASIC26.44■■□□□ 1.82
CHD2O14647 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD2O14647 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CHD2O14647 ABBA01031661.1-201ENST00000634362 1253 ntBASIC26.44■■□□□ 1.82
CHD2O14647 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CHD2O14647 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CHD2O14647 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.44■■□□□ 1.82
CHD2O14647 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CHD2O14647 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD2O14647 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD2O14647 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD2O14647 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD2O14647 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.43■■□□□ 1.82
CHD2O14647 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD2O14647 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CHD2O14647 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC26.42■■□□□ 1.82
CHD2O14647 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD2O14647 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD2O14647 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 AC148477.8-201ENST00000624298 468 ntBASIC26.42■■□□□ 1.82
CHD2O14647 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CHD2O14647 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD2O14647 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD2O14647 AC092865.5-201ENST00000545435 363 ntBASIC26.42■■□□□ 1.82
CHD2O14647 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD2O14647 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD2O14647 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CHD2O14647 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC26.41■■□□□ 1.82
CHD2O14647 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHD2O14647 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms