Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL592071.1-201ENST00000611956 408 ntBASIC32.54■■■□□ 2.8
CUX2O14529 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC32.54■■■□□ 2.8
CUX2O14529 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CUX2O14529 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CUX2O14529 CSF3-203ENST00000394148 622 ntTSL 3 BASIC32.54■■■□□ 2.8
CUX2O14529 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC32.53■■■□□ 2.8
CUX2O14529 AC092720.2-201ENST00000602388 1665 ntBASIC32.53■■■□□ 2.8
CUX2O14529 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC32.53■■■□□ 2.8
CUX2O14529 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
CUX2O14529 PMP22-202ENST00000395936 816 ntTSL 3 BASIC32.53■■■□□ 2.8
CUX2O14529 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
CUX2O14529 NME1-207ENST00000480143 964 ntTSL 2 BASIC32.53■■■□□ 2.8
CUX2O14529 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
CUX2O14529 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC32.53■■■□□ 2.8
CUX2O14529 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CUX2O14529 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC32.52■■■□□ 2.8
CUX2O14529 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CUX2O14529 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
CUX2O14529 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CUX2O14529 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC32.52■■■□□ 2.8
CUX2O14529 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
CUX2O14529 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CUX2O14529 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
CUX2O14529 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC32.51■■■□□ 2.8
CUX2O14529 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
CUX2O14529 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CUX2O14529 WWC2-AS2-201ENST00000578387 2183 ntBASIC32.51■■■□□ 2.8
CUX2O14529 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CUX2O14529 PON3-203ENST00000427422 894 ntTSL 3 BASIC32.51■■■□□ 2.79
CUX2O14529 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CUX2O14529 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
CUX2O14529 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
CUX2O14529 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CUX2O14529 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CUX2O14529 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
CUX2O14529 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CUX2O14529 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
CUX2O14529 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CUX2O14529 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CUX2O14529 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CUX2O14529 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
CUX2O14529 WDR53-203ENST00000429115 683 ntTSL 2 BASIC32.5■■■□□ 2.79
CUX2O14529 HNRNPDP1-201ENST00000439535 754 ntBASIC32.5■■■□□ 2.79
CUX2O14529 MIR3917-201ENST00000580971 93 ntBASIC32.5■■■□□ 2.79
CUX2O14529 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC32.5■■■□□ 2.79
CUX2O14529 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CUX2O14529 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
CUX2O14529 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC32.49■■■□□ 2.79
CUX2O14529 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC32.49■■■□□ 2.79
CUX2O14529 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC32.49■■■□□ 2.79
CUX2O14529 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC32.49■■■□□ 2.79
CUX2O14529 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC32.49■■■□□ 2.79
CUX2O14529 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
CUX2O14529 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CUX2O14529 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC32.48■■■□□ 2.79
CUX2O14529 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC32.48■■■□□ 2.79
CUX2O14529 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
CUX2O14529 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC32.48■■■□□ 2.79
CUX2O14529 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC32.48■■■□□ 2.79
CUX2O14529 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC32.48■■■□□ 2.79
CUX2O14529 IGHV3-41-201ENST00000613121 348 ntBASIC32.48■■■□□ 2.79
CUX2O14529 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC32.48■■■□□ 2.79
CUX2O14529 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CUX2O14529 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CUX2O14529 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CUX2O14529 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC32.47■■■□□ 2.79
CUX2O14529 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC32.47■■■□□ 2.79
CUX2O14529 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CUX2O14529 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CUX2O14529 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
CUX2O14529 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC32.47■■■□□ 2.79
CUX2O14529 KRT18P3-201ENST00000451602 1288 ntBASIC32.47■■■□□ 2.79
CUX2O14529 VENTXP7-201ENST00000475503 772 ntBASIC32.47■■■□□ 2.79
CUX2O14529 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC32.47■■■□□ 2.79
CUX2O14529 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC32.47■■■□□ 2.79
CUX2O14529 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC32.47■■■□□ 2.79
CUX2O14529 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC32.47■■■□□ 2.79
CUX2O14529 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms