Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.04■□□□□ 0.48
UPK1AO00322 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UPK1AO00322 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.03■□□□□ 0.48
UPK1AO00322 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 C1QBPP2-201ENST00000528754 825 ntBASIC18.03■□□□□ 0.48
UPK1AO00322 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.03■□□□□ 0.48
UPK1AO00322 HLA-A-209ENST00000638375 975 ntBASIC18.03■□□□□ 0.48
UPK1AO00322 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPK1AO00322 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.03■□□□□ 0.48
UPK1AO00322 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1AO00322 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.03■□□□□ 0.48
UPK1AO00322 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1AO00322 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
UPK1AO00322 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.02■□□□□ 0.48
UPK1AO00322 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.02■□□□□ 0.48
UPK1AO00322 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.02■□□□□ 0.48
UPK1AO00322 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.02■□□□□ 0.48
UPK1AO00322 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.02■□□□□ 0.48
UPK1AO00322 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 ITM2C-210ENST00000620962 501 ntBASIC18.02■□□□□ 0.48
UPK1AO00322 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.02■□□□□ 0.48
UPK1AO00322 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1AO00322 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1AO00322 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1AO00322 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1AO00322 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UPK1AO00322 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
UPK1AO00322 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 AL512353.2-201ENST00000448759 1962 ntBASIC18.01■□□□□ 0.47
UPK1AO00322 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.01■□□□□ 0.47
UPK1AO00322 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1AO00322 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UPK1AO00322 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UPK1AO00322 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UPK1AO00322 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.01■□□□□ 0.47
UPK1AO00322 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
UPK1AO00322 RPPH1-201ENST00000516869 333 ntBASIC18.01■□□□□ 0.47
UPK1AO00322 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
UPK1AO00322 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1AO00322 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK1AO00322 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK1AO00322 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms