Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
AP3B1O00203 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
AP3B1O00203 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AP3B1O00203 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.21■□□□□ 0.67
AP3B1O00203 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 CD99P1-205ENST00000527459 561 ntBASIC19.21■□□□□ 0.67
AP3B1O00203 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.21■□□□□ 0.67
AP3B1O00203 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3B1O00203 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
AP3B1O00203 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.2■□□□□ 0.66
AP3B1O00203 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.2■□□□□ 0.66
AP3B1O00203 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
AP3B1O00203 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 AL512353.2-201ENST00000448759 1962 ntBASIC19.2■□□□□ 0.66
AP3B1O00203 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP3B1O00203 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 POU5F1P3-201ENST00000428824 1078 ntBASIC19.19■□□□□ 0.66
AP3B1O00203 AC128676.1-201ENST00000454392 318 ntBASIC19.19■□□□□ 0.66
AP3B1O00203 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.19■□□□□ 0.66
AP3B1O00203 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.19■□□□□ 0.66
AP3B1O00203 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3B1O00203 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3B1O00203 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3B1O00203 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AP3B1O00203 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3B1O00203 AC004980.1-204ENST00000429707 299 ntBASIC19.18■□□□□ 0.66
AP3B1O00203 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.18■□□□□ 0.66
AP3B1O00203 AC026271.3-201ENST00000571884 352 ntBASIC19.18■□□□□ 0.66
AP3B1O00203 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3B1O00203 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
AP3B1O00203 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 HTR7P1-201ENST00000538670 1336 ntBASIC19.18■□□□□ 0.66
AP3B1O00203 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3B1O00203 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
AP3B1O00203 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms