Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.16■□□□□ 0.5
CNOT1A5YKK6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AC007225.1-201ENST00000566331 1836 ntBASIC18.15■□□□□ 0.5
CNOT1A5YKK6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AL049796.1-201ENST00000565336 1766 ntBASIC18.15■□□□□ 0.5
CNOT1A5YKK6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AL035633.1-201ENST00000406139 838 ntBASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AC004967.1-201ENST00000453589 447 ntBASIC18.15■□□□□ 0.5
CNOT1A5YKK6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 IGHV3-22-201ENST00000520721 359 ntBASIC18.15■□□□□ 0.5
CNOT1A5YKK6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT1A5YKK6 AL691432.2-201ENST00000607222 2038 ntBASIC18.14■□□□□ 0.5
CNOT1A5YKK6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT1A5YKK6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT1A5YKK6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.14■□□□□ 0.5
CNOT1A5YKK6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.14■□□□□ 0.5
CNOT1A5YKK6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.5
CNOT1A5YKK6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 AC098831.1-202ENST00000438821 336 ntBASIC18.14■□□□□ 0.49
CNOT1A5YKK6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT1A5YKK6 AP001271.2-201ENST00000624018 1556 ntBASIC18.14■□□□□ 0.49
CNOT1A5YKK6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 AC112497.1-201ENST00000624824 639 ntBASIC18.13■□□□□ 0.49
CNOT1A5YKK6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT1A5YKK6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 RPS8P6-201ENST00000426177 609 ntBASIC18.12■□□□□ 0.49
CNOT1A5YKK6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 VENTXP7-201ENST00000475503 772 ntBASIC18.12■□□□□ 0.49
CNOT1A5YKK6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms