Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 HCG11-201ENST00000411553 5696 ntBASIC19.25■□□□□ 0.67
CCDC78A2IDD5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 PRORSD1P-201ENST00000295112 541 ntBASIC19.25■□□□□ 0.67
CCDC78A2IDD5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 AL359736.2-201ENST00000621992 437 ntBASIC19.25■□□□□ 0.67
CCDC78A2IDD5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC78A2IDD5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 RPS2P4-201ENST00000476944 856 ntBASIC19.23■□□□□ 0.67
CCDC78A2IDD5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC78A2IDD5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
CCDC78A2IDD5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 AL158047.1-201ENST00000445918 881 ntBASIC19.22■□□□□ 0.67
CCDC78A2IDD5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC78A2IDD5 AP002982.1-201ENST00000492365 877 ntBASIC19.22■□□□□ 0.67
CCDC78A2IDD5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms