Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 AP000974.1-201ENST00000623909 2387 ntBASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 UNC93B2-201ENST00000285383 730 ntBASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 SLC25A1P4-201ENST00000567977 778 ntBASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CCDC196A0A1B0GTZ2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC196A0A1B0GTZ2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 MFAP1P1-201ENST00000442257 1255 ntBASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CCDC196A0A1B0GTZ2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 RBM17P1-201ENST00000453646 1190 ntBASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 AP005242.2-201ENST00000580065 1175 ntBASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC196A0A1B0GTZ2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms