Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 Z98044.1-201ENST00000632503 1764 ntBASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 KRT19P1-201ENST00000405746 1186 ntBASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 MFSD11-216ENST00000590393 1141 ntBASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV34A0A0B4J273 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 AC011270.2-201ENST00000624293 2550 ntBASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 AC010536.3-201ENST00000620306 533 ntBASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 AC105020.6-201ENST00000621523 1217 ntBASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 BICD1-207ENST00000551848 1962 ntBASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV34A0A0B4J273 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 AL354751.1-201ENST00000412768 1863 ntBASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 TNRC18P3-201ENST00000441896 2691 ntBASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV34A0A0B4J273 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms