Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 AC009113.1-201ENST00000570267 2443 ntBASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 AC087623.3-201ENST00000607047 1098 ntBASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-1A0A0B4J241 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 AC005082.1-201ENST00000413042 2259 ntBASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 AL390719.1-204ENST00000412397 1219 ntBASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 KRT18P5-201ENST00000436075 1291 ntBASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-1A0A0B4J241 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 AC093787.1-201ENST00000450396 207 ntBASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-1A0A0B4J241 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms