Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AP000692.2-201ENST00000608391 879 ntBASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 DGCR10-201ENST00000609839 495 ntBASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AL161938.1-201ENST00000569833 2180 ntBASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FAM210CP-201ENST00000445714 574 ntBASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms