Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 MCCD1P1-208ENST00000445732 328 ntBASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 MIR3180-5-201ENST00000583743 153 ntBASIC18■□□□□ 0.47
CCDC187A0A096LP49 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 AC016734.2-201ENST00000624325 1377 ntBASIC18■□□□□ 0.47
CCDC187A0A096LP49 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 AC004870.1-201ENST00000315132 882 ntBASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 RN7SL510P-201ENST00000581311 263 ntBASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC187A0A096LP49 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC187A0A096LP49 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 KRT8P26-201ENST00000534154 1276 ntBASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC187A0A096LP49 AC093525.10-201ENST00000625130 1569 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms