Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR494-201ENST00000349529 81 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU1-108P-201ENST00000362556 161 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 Y_RNA.52-201ENST00000362760 96 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 U3.8-201ENST00000363675 217 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 RNA5SP515-201ENST00000364570 118 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-487P-201ENST00000365430 104 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-1323P-201ENST00000384025 107 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR765-201ENST00000390226 114 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 BX510359.2-201ENST00000417920 305 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AL590762.4-201ENST00000425885 253 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 POLR3GP1-201ENST00000594073 261 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AC012616.1-201ENST00000600294 197 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AC108738.1-201ENST00000603703 237 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AC012468.1-201ENST00000604888 430 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 AL021707.8-201ENST00000609428 183 ntBASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU4-41P-201ENST00000364426 143 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR551A-201ENST00000385042 96 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 RNA5SP136-201ENST00000410906 107 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 AC027124.2-201ENST00000428249 105 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 LINC02210-201ENST00000444561 288 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 SRIP1-201ENST00000489235 288 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 RN7SKP276-201ENST00000516242 268 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 SNORA18.4-201ENST00000516440 124 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU7-116P-201ENST00000516940 62 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 NOL8P1-201ENST00000508336 3529 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 AC002543.1-201ENST00000299783 1954 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 MUC2-202ENST00000613187 4845 ntBASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA4Q9Y5G9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AC126323.6-202ENST00000568092 3511 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RPL23P2-201ENST00000320371 421 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU1-75P-201ENST00000347264 129 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 SNORD114-7-201ENST00000362520 77 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-217P-201ENST00000384164 104 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU2-70P-201ENST00000410718 179 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AL358232.1-201ENST00000448030 501 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AZGP1P2-201ENST00000454506 345 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RN7SL132P-201ENST00000478131 296 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AC021205.2-201ENST00000480069 347 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RPL23AP54-201ENST00000495129 419 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR5006-201ENST00000583027 110 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR6820-201ENST00000611508 62 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR2052-201ENST00000636055 55 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AC139713.2-214ENST00000642059 1811 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 AC104964.3-201ENST00000606115 2860 ntBASIC5.3□□□□□ -1.56
PCDHGA4Q9Y5G9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 SNORA17.1-201ENST00000362945 126 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-674P-201ENST00000363831 107 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR891A-201ENST00000401237 79 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 RPL23AP1-201ENST00000428990 471 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 AL445687.1-201ENST00000439946 251 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 AC010618.1-201ENST00000469924 477 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 MRPS36P2-201ENST00000512569 299 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 RN7SKP66-201ENST00000516681 231 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 AC126177.5-201ENST00000549599 178 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR3691-201ENST00000578066 90 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms