Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 RNY3P11-201ENST00000364153 102 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 RNU6-1062P-201ENST00000383908 107 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AL445529.1-201ENST00000398713 389 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 RNU6-607P-201ENST00000411283 108 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AL030996.1-201ENST00000411430 235 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC017079.2-201ENST00000416102 485 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 RPS3AP12-201ENST00000443616 753 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 PRDX3P3-201ENST00000447765 522 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 PRSS3P4-201ENST00000453323 162 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 MTCO3P8-201ENST00000453691 755 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 HMGB3P17-201ENST00000504195 649 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC104619.4-201ENST00000510773 249 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 SNORA25.11-201ENST00000515935 105 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 RNU6-914P-201ENST00000516749 109 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 HSPE1P20-201ENST00000538133 289 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 OR1M4P-201ENST00000589199 287 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AL161756.2-201ENST00000604597 246 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC019176.2-201ENST00000611579 315 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC084757.4-201ENST00000616350 526 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 MIR7153-201ENST00000637758 57 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF48Q96MX3 AC103988.1-201ENST00000566382 2177 ntBASIC3.1□□□□□ -1.91
ZNF48Q96MX3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 OR56A5-201ENST00000340110 738 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 RNU6-806P-201ENST00000365147 105 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 FCF1P4-201ENST00000448326 183 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC113155.1-201ENST00000511141 769 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 SNORA70.16-201ENST00000516390 95 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 SNORA31.22-201ENST00000517204 135 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC008489.1-201ENST00000524271 483 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC006600.1-201ENST00000572529 153 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 MIR3922-201ENST00000585192 84 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 SRGNP1-201ENST00000603392 451 ntBASIC3.09□□□□□ -1.91
ZNF48Q96MX3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF48Q96MX3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.09□□□□□ -1.92
ZNF48Q96MX3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF48Q96MX3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF48Q96MX3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 RNY1P16-201ENST00000363063 111 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 RNU6-790P-201ENST00000384479 105 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 HLFP1-201ENST00000402375 499 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 HSPE1P8-201ENST00000406997 288 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 CYCSP33-201ENST00000414485 327 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AL590664.1-201ENST00000448065 339 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 RPL39P38-201ENST00000467018 153 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 HMGN1P11-201ENST00000508668 303 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AC110768.1-201ENST00000509222 400 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 RNU7-4P-201ENST00000516961 62 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 RNU6-840P-201ENST00000517275 65 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AC090517.1-201ENST00000569307 266 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 MIR548AC-201ENST00000585049 88 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 VN1R91P-201ENST00000594377 169 ntBASIC3.08□□□□□ -1.92
ZNF48Q96MX3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms