Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.51□□□□□ -1.69
LMNB1P20700 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMNB1P20700 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMNB1P20700 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMNB1P20700 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
LMNB1P20700 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMNB1P20700 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMNB1P20700 MTND5P27-201ENST00000428871 1720 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.5□□□□□ -1.69
LMNB1P20700 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 RNU6-874P-201ENST00000362390 105 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 SNORA31-201ENST00000362607 130 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 RNU6-595P-201ENST00000363944 107 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LMNB1P20700 RAC1P3-201ENST00000416129 580 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 ELOCP20-201ENST00000422460 345 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AL356867.1-201ENST00000429623 299 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.5□□□□□ -1.69
LMNB1P20700 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.5□□□□□ -1.69
LMNB1P20700 AC013470.1-201ENST00000453438 462 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 RPS29P27-201ENST00000463711 170 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC104564.1-201ENST00000493028 407 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 RNU2-58P-201ENST00000516403 183 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AP005902.1-201ENST00000521358 186 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.5□□□□□ -1.69
LMNB1P20700 TRAV28-201ENST00000557548 323 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 LARP7P3-201ENST00000579888 337 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.5□□□□□ -1.69
LMNB1P20700 AP000787.2-201ENST00000604432 568 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC004805.2-201ENST00000605382 482 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC012603.1-201ENST00000606424 528 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AC006023.2-201ENST00000609916 167 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AL442067.1-201ENST00000613261 223 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.5□□□□□ -1.69
LMNB1P20700 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.5□□□□□ -1.69
LMNB1P20700 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMNB1P20700 ZNF299P-201ENST00000406845 1804 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 AL353743.1-202ENST00000431724 1695 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LMNB1P20700 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 MTND5P7-201ENST00000413558 1798 ntBASIC4.5□□□□□ -1.69
LMNB1P20700 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
LMNB1P20700 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMNB1P20700 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMNB1P20700 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMNB1P20700 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMNB1P20700 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.49□□□□□ -1.69
LMNB1P20700 RNA5SP189-201ENST00000364920 115 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 RNU6-1026P-201ENST00000384465 108 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 MT-TW-201ENST00000387382 68 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 MTND3P9-201ENST00000429526 346 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 AC092423.1-201ENST00000430165 186 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 USP9YP16-201ENST00000430287 407 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 AC079354.2-201ENST00000453523 154 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 ANP32BP2-201ENST00000454525 545 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 USP9YP23-201ENST00000455085 407 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 snoU109.2-201ENST00000459316 135 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 Y_RNA.680-201ENST00000516441 93 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 RNU7-4P-201ENST00000516961 62 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 RNU6-388P-201ENST00000517012 105 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 RNU6-389P-201ENST00000517048 105 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 MIR8076-201ENST00000611401 83 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.49□□□□□ -1.69
LMNB1P20700 MTND5P9-201ENST00000503854 1755 ntBASIC4.49□□□□□ -1.69
LMNB1P20700 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.49□□□□□ -1.69
LMNB1P20700 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMNB1P20700 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMNB1P20700 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.48□□□□□ -1.69
LMNB1P20700 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 AC233263.6-201ENST00000631132 1963 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 RNU6-708P-201ENST00000384217 107 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 MIR625-201ENST00000385047 85 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 MIR325-201ENST00000385260 98 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 MIR1290-201ENST00000408735 78 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 RNU2-37P-201ENST00000410695 177 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 EIF4EP2-201ENST00000422816 654 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.48□□□□□ -1.69
LMNB1P20700 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.48□□□□□ -1.69
LMNB1P20700 AC073910.1-201ENST00000445047 438 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
LMNB1P20700 AC078918.1-201ENST00000498515 228 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC093852.1-201ENST00000503587 266 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AK3P2-201ENST00000507976 429 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 RAC1P2-201ENST00000511164 579 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.48□□□□□ -1.69
LMNB1P20700 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.48□□□□□ -1.69
LMNB1P20700 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.48□□□□□ -1.69
LMNB1P20700 AC090517.1-201ENST00000569307 266 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.48□□□□□ -1.69
LMNB1P20700 AC125232.2-201ENST00000592457 143 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 VN1R91P-201ENST00000594377 169 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.48□□□□□ -1.69
LMNB1P20700 AL139395.1-201ENST00000603662 160 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC005046.1-201ENST00000608515 625 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms