Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC090897.2-201ENST00000581715 130 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC005176.2-201ENST00000596933 147 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC010999.1-201ENST00000611856 324 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC006001.4-201ENST00000622243 395 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 IGHVIII-44-202ENST00000636235 289 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFAP04085 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDGFAP04085 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
PDGFAP04085 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFAP04085 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDGFAP04085 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
PDGFAP04085 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
PDGFAP04085 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFAP04085 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFAP04085 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 RNU1-35P-201ENST00000362782 153 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 Y_RNA.122-201ENST00000363331 96 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RNU6-961P-201ENST00000363893 105 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 Y_RNA.292-201ENST00000364904 97 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RNY4P28-201ENST00000365281 93 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 SNORA1.3-201ENST00000384676 136 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RNU2-61P-201ENST00000411069 191 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RPL23AP36-201ENST00000413895 458 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFAP04085 RPL7AP25-201ENST00000423357 805 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 FTH1P6-201ENST00000430768 320 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFAP04085 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 AL162591.2-201ENST00000449634 317 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 RN7SL517P-201ENST00000462240 305 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 AC115990.1-201ENST00000526957 301 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.32□□□□□ -1.72
PDGFAP04085 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 SNORA74C-1-201ENST00000580726 201 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 MIR3609-201ENST00000582661 80 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFAP04085 AC008749.1-201ENST00000597650 306 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.32□□□□□ -1.72
PDGFAP04085 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 AP000542.2-201ENST00000623199 6179 ntBASIC4.32□□□□□ -1.72
PDGFAP04085 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFAP04085 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDGFAP04085 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFAP04085 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 AL672167.1-203ENST00000641299 2975 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 RBBP8P1-201ENST00000449447 1844 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDGFAP04085 MIR410-201ENST00000362222 80 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RNU6-1285P-201ENST00000363480 105 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RNU6-1020P-201ENST00000363684 107 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RNU6-873P-201ENST00000363833 107 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RNU6-622P-201ENST00000384272 103 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AL592291.1-201ENST00000403830 352 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AC005300.1-201ENST00000428401 373 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFAP04085 AC112220.1-201ENST00000434628 355 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFAP04085 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFAP04085 POLR2KP2-201ENST00000438155 177 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFAP04085 RPL21P126-201ENST00000470049 478 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RPL30P12-201ENST00000474666 353 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 RPL36AP41-201ENST00000493820 306 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 AC020593.1-201ENST00000507399 299 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 IGLVIV-65-201ENST00000517313 360 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 CYCSP23-201ENST00000519781 313 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFAP04085 ARF4P1-201ENST00000605447 541 ntBASIC4.31□□□□□ -1.72
PDGFAP04085 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFAP04085 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFAP04085 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFAP04085 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFAP04085 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFAP04085 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFAP04085 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 RNU6-774P-201ENST00000363238 107 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 Y_RNA.331-201ENST00000365267 102 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 429.2 ms