Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.75□□□□□ -1.65
H3BM21 EIF1AXP1-201ENST00000419267 435 ntBASIC4.75□□□□□ -1.65
H3BM21 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
H3BM21 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.75□□□□□ -1.65
H3BM21 snoU13.1-201ENST00000459157 104 ntBASIC4.75□□□□□ -1.65
H3BM21 RN7SL558P-201ENST00000497468 299 ntBASIC4.75□□□□□ -1.65
H3BM21 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.75□□□□□ -1.65
H3BM21 GMPSP1-201ENST00000514075 579 ntBASIC4.75□□□□□ -1.65
H3BM21 RNU6-1146P-201ENST00000516282 102 ntBASIC4.75□□□□□ -1.65
H3BM21 RNA5SP360-201ENST00000516555 118 ntBASIC4.75□□□□□ -1.65
H3BM21 RNA5SP392-201ENST00000516905 112 ntBASIC4.75□□□□□ -1.65
H3BM21 RNU6-58P-201ENST00000517143 103 ntBASIC4.75□□□□□ -1.65
H3BM21 RNU6-709P-201ENST00000517257 104 ntBASIC4.75□□□□□ -1.65
H3BM21 HSPE1P4-201ENST00000550617 308 ntBASIC4.75□□□□□ -1.65
H3BM21 MIR5096-201ENST00000583713 70 ntBASIC4.75□□□□□ -1.65
H3BM21 AL121932.1-201ENST00000605542 214 ntBASIC4.75□□□□□ -1.65
H3BM21 AL022401.1-201ENST00000619498 108 ntBASIC4.75□□□□□ -1.65
H3BM21 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.75□□□□□ -1.65
H3BM21 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.75□□□□□ -1.65
H3BM21 SAGE4P-201ENST00000442271 3381 ntBASIC4.75□□□□□ -1.65
H3BM21 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
H3BM21 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
H3BM21 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
H3BM21 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
H3BM21 OR14L1P-202ENST00000641545 3009 ntBASIC4.75□□□□□ -1.65
H3BM21 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 RNU6-756P-201ENST00000383997 107 ntBASIC4.74□□□□□ -1.65
H3BM21 MIR29B2-201ENST00000385055 81 ntBASIC4.74□□□□□ -1.65
H3BM21 RNA5SP332-201ENST00000391063 115 ntBASIC4.74□□□□□ -1.65
H3BM21 RNU2-54P-201ENST00000410299 190 ntBASIC4.74□□□□□ -1.65
H3BM21 RNU2-43P-201ENST00000410306 190 ntBASIC4.74□□□□□ -1.65
H3BM21 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.74□□□□□ -1.65
H3BM21 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.74□□□□□ -1.65
H3BM21 AC092798.1-201ENST00000458542 409 ntBASIC4.74□□□□□ -1.65
H3BM21 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
H3BM21 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.74□□□□□ -1.65
H3BM21 SCARNA22-201ENST00000503991 125 ntBASIC4.74□□□□□ -1.65
H3BM21 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.74□□□□□ -1.65
H3BM21 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.74□□□□□ -1.65
H3BM21 RNA5SP249-201ENST00000516127 99 ntBASIC4.74□□□□□ -1.65
H3BM21 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.74□□□□□ -1.65
H3BM21 AC018448.1-201ENST00000552843 316 ntBASIC4.74□□□□□ -1.65
H3BM21 ZNF192P1-203ENST00000565888 810 ntBASIC4.74□□□□□ -1.65
H3BM21 AL355812.1-201ENST00000603215 216 ntBASIC4.74□□□□□ -1.65
H3BM21 LINC00901.1-201ENST00000617252 152 ntBASIC4.74□□□□□ -1.65
H3BM21 MIR7703-201ENST00000620784 77 ntBASIC4.74□□□□□ -1.65
H3BM21 AL136164.4-201ENST00000625013 2135 ntBASIC4.74□□□□□ -1.65
H3BM21 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 SMG1P6-201ENST00000532337 2930 ntBASIC4.74□□□□□ -1.65
H3BM21 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
H3BM21 AC090971.4-201ENST00000560291 1800 ntBASIC4.74□□□□□ -1.65
H3BM21 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.73□□□□□ -1.65
H3BM21 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
H3BM21 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
H3BM21 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
H3BM21 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
H3BM21 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
H3BM21 Y_RNA.328-201ENST00000365208 113 ntBASIC4.73□□□□□ -1.65
H3BM21 SNORA62-201ENST00000365493 153 ntBASIC4.73□□□□□ -1.65
H3BM21 RNU6-356P-201ENST00000384140 107 ntBASIC4.73□□□□□ -1.65
H3BM21 RNU6-1152P-201ENST00000384576 107 ntBASIC4.73□□□□□ -1.65
H3BM21 MT-TT-201ENST00000387460 66 ntBASIC4.73□□□□□ -1.65
H3BM21 AL512604.1-201ENST00000404812 257 ntBASIC4.73□□□□□ -1.65
H3BM21 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.73□□□□□ -1.65
H3BM21 AC136628.3-201ENST00000521868 290 ntBASIC4.73□□□□□ -1.65
H3BM21 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
H3BM21 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.73□□□□□ -1.65
H3BM21 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
H3BM21 AL442128.1-201ENST00000615151 90 ntBASIC4.73□□□□□ -1.65
H3BM21 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
H3BM21 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
H3BM21 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
H3BM21 AC138915.1-201ENST00000565427 1685 ntBASIC4.73□□□□□ -1.65
H3BM21 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.73□□□□□ -1.65
H3BM21 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.73□□□□□ -1.65
H3BM21 OR51H2P-202ENST00000641424 3046 ntBASIC4.72□□□□□ -1.65
H3BM21 AC126323.6-202ENST00000568092 3511 ntBASIC4.72□□□□□ -1.65
H3BM21 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
H3BM21 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
H3BM21 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.72□□□□□ -1.65
H3BM21 RNU6-1155P-201ENST00000363554 107 ntBASIC4.72□□□□□ -1.65
H3BM21 RNU6-728P-201ENST00000365375 104 ntBASIC4.72□□□□□ -1.65
H3BM21 MIR488-201ENST00000365739 83 ntBASIC4.72□□□□□ -1.65
H3BM21 SNORA29-201ENST00000384183 140 ntBASIC4.72□□□□□ -1.65
H3BM21 SNORA20B-201ENST00000384220 132 ntBASIC4.72□□□□□ -1.65
H3BM21 MIR34A-201ENST00000385130 110 ntBASIC4.72□□□□□ -1.65
H3BM21 MT-TC-201ENST00000387405 66 ntBASIC4.72□□□□□ -1.65
H3BM21 RNA5SP225-201ENST00000410874 135 ntBASIC4.72□□□□□ -1.65
H3BM21 RPL26P27-201ENST00000414397 437 ntBASIC4.72□□□□□ -1.65
H3BM21 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.72□□□□□ -1.65
H3BM21 AC006028.1-201ENST00000438379 402 ntBASIC4.72□□□□□ -1.65
H3BM21 AL162591.2-201ENST00000449634 317 ntBASIC4.72□□□□□ -1.65
H3BM21 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.72□□□□□ -1.65
H3BM21 RPL23AP24-201ENST00000458203 385 ntBASIC4.72□□□□□ -1.65
H3BM21 AC087588.1-201ENST00000462203 316 ntBASIC4.72□□□□□ -1.65
H3BM21 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.72□□□□□ -1.65
H3BM21 SNORA40.13-201ENST00000516379 120 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms