Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 MAPK10-344ENST00000641718 3746 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC020658.2-201ENST00000559030 4020 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 AC006058.1-201ENST00000568686 5067 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU6-664P-201ENST00000362381 107 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORD60.1-201ENST00000362451 73 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU6-724P-201ENST00000390958 105 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 AL034345.1-201ENST00000407768 123 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORA11.4-201ENST00000408823 129 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 IGLC6-201ENST00000410078 317 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SNX18P14-201ENST00000429308 574 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RPL12P3-201ENST00000440080 396 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL587P-201ENST00000459853 281 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL303P-201ENST00000469773 251 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL259P-201ENST00000478499 253 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 AC006070.1-201ENST00000508151 193 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP147-201ENST00000516493 109 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP360-201ENST00000516555 118 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR4266-201ENST00000583300 55 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 AL078603.1-201ENST00000603824 313 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 METAP1-212ENST00000625963 147 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRTAP3-3Q9BYR6 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC3.53□□□□□ -1.85
KRTAP3-3Q9BYR6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
KRTAP3-3Q9BYR6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
KRTAP3-3Q9BYR6 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
KRTAP3-3Q9BYR6 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
KRTAP3-3Q9BYR6 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SKP107-201ENST00000364157 290 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU1-24P-201ENST00000364285 165 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 SNORD101-201ENST00000384027 73 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SKP62-201ENST00000384539 329 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 SNORD63B-201ENST00000411005 70 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SL241P-201ENST00000482973 236 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RPS4XP23-201ENST00000487801 237 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU11-2P-201ENST00000516898 142 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AC243312.1-201ENST00000570582 275 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SL835P-201ENST00000579920 262 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AL513218.1-201ENST00000606527 391 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 AC002076.2-201ENST00000617362 122 ntBASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRTAP3-3Q9BYR6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-3Q9BYR6 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRTAP3-3Q9BYR6 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms